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MIR5002 (microRNA 5002)

Identity

Alias_symbol (synonym)hsa-mir-5002
Other alias-
HGNC (Hugo) MIR5002
LocusID (NCBI) 100847021
Atlas_Id 69726
Location 3q21.2  [Link to chromosome band 3q21]
Location_base_pair Starts at 124132929 and ends at 124133025 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5002   43470
Cards
Entrez_Gene (NCBI)MIR5002  100847021  microRNA 5002
Aliases
GeneCards (Weizmann)MIR5002
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:124132929-124133025 [Contig_View]  MIR5002 [Vega]
TCGA cBioPortalMIR5002
AceView (NCBI)MIR5002
Genatlas (Paris)MIR5002
WikiGenes100847021
SOURCE (Princeton)MIR5002
Genetics Home Reference (NIH)MIR5002
miRBaseMIR5002
dbDEMCMIR5002
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5002  -     chr3:124132929-124133025 +  3q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5002  -     3q21.2   [Description]    (hg19-Feb_2009)
EnsemblMIR5002 - 3q21.2 [CytoView hg19]  MIR5002 - 3q21.2 [CytoView hg38]
Mapping of homologs : NCBIMIR5002 [Mapview hg19]  MIR5002 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5002
Gene ExpressionMIR5002 [ NCBI-GEO ]   MIR5002 [ EBI - ARRAY_EXPRESS ]   MIR5002 [ SEEK ]   MIR5002 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5002 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847021
GTEX Portal (Tissue expression)MIR5002
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5002
DMDM Disease mutations100847021
Blocks (Seattle)MIR5002
Protein Interaction databases
BioGRIDMIR5002
STRING (EMBL)MIR5002
ZODIACMIR5002
Ontologies - Pathways
Huge Navigator MIR5002 [HugePedia]
snp3D : Map Gene to Disease100847021
BioCentury BCIQMIR5002
ClinGenMIR5002
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847021
Clinical trialMIR5002
Miscellaneous
canSAR (ICR)MIR5002 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5002
EVEXMIR5002
GoPubMedMIR5002
iHOPMIR5002
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:08:24 CET 2017

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