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MIR5006 (microRNA 5006)

Identity

Alias_symbol (synonym)hsa-mir-5006
Other alias-
HGNC (Hugo) MIR5006
LocusID (NCBI) 100847026
Atlas_Id 69729
Location 13q14.11  [Link to chromosome band 13q14]
Location_base_pair Starts at 41568286 and ends at 41568395 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5006   43495
Cards
Entrez_Gene (NCBI)MIR5006  100847026  microRNA 5006
Aliases
GeneCards (Weizmann)MIR5006
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr13:41568286-41568395 [Contig_View]  MIR5006 [Vega]
TCGA cBioPortalMIR5006
AceView (NCBI)MIR5006
Genatlas (Paris)MIR5006
WikiGenes100847026
SOURCE (Princeton)MIR5006
Genetics Home Reference (NIH)MIR5006
miRBaseMIR5006
dbDEMCMIR5006
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5006  -     chr13:41568286-41568395 -  13q14.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5006  -     13q14.11   [Description]    (hg19-Feb_2009)
EnsemblMIR5006 - 13q14.11 [CytoView hg19]  MIR5006 - 13q14.11 [CytoView hg38]
Mapping of homologs : NCBIMIR5006 [Mapview hg19]  MIR5006 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5006
Gene ExpressionMIR5006 [ NCBI-GEO ]   MIR5006 [ EBI - ARRAY_EXPRESS ]   MIR5006 [ SEEK ]   MIR5006 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5006 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847026
GTEX Portal (Tissue expression)MIR5006
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5006
DMDM Disease mutations100847026
Blocks (Seattle)MIR5006
Protein Interaction databases
BioGRIDMIR5006
STRING (EMBL)MIR5006
ZODIACMIR5006
Ontologies - Pathways
Huge Navigator MIR5006 [HugePedia]
snp3D : Map Gene to Disease100847026
BioCentury BCIQMIR5006
ClinGenMIR5006
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847026
Clinical trialMIR5006
Miscellaneous
canSAR (ICR)MIR5006 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5006
EVEXMIR5006
GoPubMedMIR5006
iHOPMIR5006
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:59:27 CET 2017

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