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MIR5008 (microRNA 5008)

Identity

Alias_symbol (synonym)hsa-mir-5008
Other alias-
HGNC (Hugo) MIR5008
LocusID (NCBI) 100847072
Atlas_Id 69731
Location 1q42.13  [Link to chromosome band 1q42]
Location_base_pair Starts at 227941590 and ends at 227941683 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5008   43546
Cards
Entrez_Gene (NCBI)MIR5008  100847072  microRNA 5008
Aliases
GeneCards (Weizmann)MIR5008
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:227941590-227941683 [Contig_View]  MIR5008 [Vega]
TCGA cBioPortalMIR5008
AceView (NCBI)MIR5008
Genatlas (Paris)MIR5008
WikiGenes100847072
SOURCE (Princeton)MIR5008
Genetics Home Reference (NIH)MIR5008
miRBaseMIR5008
dbDEMCMIR5008
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5008  -     chr1:227941590-227941683 -  1q42.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5008  -     1q42.13   [Description]    (hg19-Feb_2009)
EnsemblMIR5008 - 1q42.13 [CytoView hg19]  MIR5008 - 1q42.13 [CytoView hg38]
Mapping of homologs : NCBIMIR5008 [Mapview hg19]  MIR5008 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5008
Gene ExpressionMIR5008 [ NCBI-GEO ]   MIR5008 [ EBI - ARRAY_EXPRESS ]   MIR5008 [ SEEK ]   MIR5008 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5008 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847072
GTEX Portal (Tissue expression)MIR5008
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5008
DMDM Disease mutations100847072
Blocks (Seattle)MIR5008
Protein Interaction databases
BioGRIDMIR5008
STRING (EMBL)MIR5008
ZODIACMIR5008
Ontologies - Pathways
Huge Navigator MIR5008 [HugePedia]
snp3D : Map Gene to Disease100847072
BioCentury BCIQMIR5008
ClinGenMIR5008
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847072
Clinical trialMIR5008
Miscellaneous
canSAR (ICR)MIR5008 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5008
EVEXMIR5008
GoPubMedMIR5008
iHOPMIR5008
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:59:28 CET 2017

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