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MIR5088 (microRNA 5088)

Identity

Alias_symbol (synonym)hsa-mir-5088
Other aliasmir-5088
HGNC (Hugo) MIR5088
LocusID (NCBI) 100847074
Atlas_Id 69741
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 50185374 and ends at 50185452 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5088   43489
Cards
Entrez_Gene (NCBI)MIR5088  100847074  microRNA 5088
Aliasesmir-5088
GeneCards (Weizmann)MIR5088
Ensembl hg19 (Hinxton) [Gene_View]  chr19:50185374-50185452 [Contig_View]  MIR5088 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:50185374-50185452 [Contig_View]  MIR5088 [Vega]
TCGA cBioPortalMIR5088
AceView (NCBI)MIR5088
Genatlas (Paris)MIR5088
WikiGenes100847074
SOURCE (Princeton)MIR5088
Genetics Home Reference (NIH)MIR5088
miRBaseMIR5088
dbDEMCMIR5088
Genomic and cartography
GoldenPath hg19 (UCSC)MIR5088  -     chr19:50185374-50185452 +  19q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR5088  -     19q13.33   [Description]    (hg38-Dec_2013)
EnsemblMIR5088 - 19q13.33 [CytoView hg19]  MIR5088 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBIMIR5088 [Mapview hg19]  MIR5088 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611507
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)MIR5088
Gene ExpressionMIR5088 [ NCBI-GEO ]   MIR5088 [ EBI - ARRAY_EXPRESS ]   MIR5088 [ SEEK ]   MIR5088 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5088 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847074
GTEX Portal (Tissue expression)MIR5088
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5088
DMDM Disease mutations100847074
Blocks (Seattle)MIR5088
Protein Interaction databases
BioGRIDMIR5088
STRING (EMBL)MIR5088
ZODIACMIR5088
Ontologies - Pathways
Huge Navigator MIR5088 [HugePedia]
snp3D : Map Gene to Disease100847074
BioCentury BCIQMIR5088
ClinGenMIR5088
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847074
Clinical trialMIR5088
Miscellaneous
canSAR (ICR)MIR5088 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5088
EVEXMIR5088
GoPubMedMIR5088
iHOPMIR5088
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:31:13 CET 2017

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