Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR509-3 (microRNA 509-3)

Identity

Alias_namesMIRN509-3
Alias_symbol (synonym)hsa-mir-509-3
Other aliasmir-509-3
HGNC (Hugo) MIR509-3
LocusID (NCBI) 100126337
Atlas_Id 52710
Location Xq27.3  [Link to chromosome band Xq27]
Location_base_pair Starts at 146340283 and ends at 146340358 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR509-3   33675
Cards
Entrez_Gene (NCBI)MIR509-3  100126337  microRNA 509-3
AliasesMIRN509-3; mir-509-3
GeneCards (Weizmann)MIR509-3
Ensembl hg19 (Hinxton)ENSG00000212014 [Gene_View]  chrX:146340283-146340358 [Contig_View]  MIR509-3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000212014 [Gene_View]  chrX:146340283-146340358 [Contig_View]  MIR509-3 [Vega]
ICGC DataPortalENSG00000212014
TCGA cBioPortalMIR509-3
AceView (NCBI)MIR509-3
Genatlas (Paris)MIR509-3
WikiGenes100126337
SOURCE (Princeton)MIR509-3
Genetics Home Reference (NIH)MIR509-3
miRBaseMIR509-3
dbDEMCMIR509-3
Genomic and cartography
GoldenPath hg19 (UCSC)MIR509-3  -     chrX:146340283-146340358 -  Xq27.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR509-3  -     Xq27.3   [Description]    (hg38-Dec_2013)
EnsemblMIR509-3 - Xq27.3 [CytoView hg19]  MIR509-3 - Xq27.3 [CytoView hg38]
Mapping of homologs : NCBIMIR509-3 [Mapview hg19]  MIR509-3 [Mapview hg38]
OMIM300876   
Gene and transcription
Genbank (Entrez)LM609976
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000023 NC_018934 NT_011681 NW_004929447
Consensus coding sequences : CCDS (NCBI)MIR509-3
Alternative Splicing GalleryENSG00000212014
Gene ExpressionMIR509-3 [ NCBI-GEO ]   MIR509-3 [ EBI - ARRAY_EXPRESS ]   MIR509-3 [ SEEK ]   MIR509-3 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR509-3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100126337
GTEX Portal (Tissue expression)MIR509-3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR509-3
DMDM Disease mutations100126337
Blocks (Seattle)MIR509-3
Human Protein AtlasENSG00000212014
Protein Interaction databases
FunCoupENSG00000212014
BioGRIDMIR509-3
STRING (EMBL)MIR509-3
ZODIACMIR509-3
Ontologies - Pathways
Huge Navigator MIR509-3 [HugePedia]
snp3D : Map Gene to Disease100126337
BioCentury BCIQMIR509-3
ClinGenMIR509-3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100126337
Chemical/Pharm GKB GenePA164722757
Clinical trialMIR509-3
Miscellaneous
canSAR (ICR)MIR509-3 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR509-3
EVEXMIR509-3
GoPubMedMIR509-3
iHOPMIR509-3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:10:11 CEST 2017

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