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MIR5090 (microRNA 5090)

Identity

Alias_symbol (synonym)hsa-mir-5090
Other aliasmir-5090
HGNC (Hugo) MIR5090
LocusID (NCBI) 100847073
Atlas_Id 69743
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 102465742 and ends at 102465826 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5090   43547
Cards
Entrez_Gene (NCBI)MIR5090  100847073  microRNA 5090
Aliasesmir-5090
GeneCards (Weizmann)MIR5090
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:102465742-102465826 [Contig_View]  MIR5090 [Vega]
TCGA cBioPortalMIR5090
AceView (NCBI)MIR5090
Genatlas (Paris)MIR5090
WikiGenes100847073
SOURCE (Princeton)MIR5090
Genetics Home Reference (NIH)MIR5090
miRBaseMIR5090
dbDEMCMIR5090
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5090  -     chr7:102465742-102465826 +  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5090  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblMIR5090 - 7q22.1 [CytoView hg19]  MIR5090 - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBIMIR5090 [Mapview hg19]  MIR5090 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611508
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5090
Gene ExpressionMIR5090 [ NCBI-GEO ]   MIR5090 [ EBI - ARRAY_EXPRESS ]   MIR5090 [ SEEK ]   MIR5090 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5090 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847073
GTEX Portal (Tissue expression)MIR5090
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5090
DMDM Disease mutations100847073
Blocks (Seattle)MIR5090
Protein Interaction databases
BioGRIDMIR5090
STRING (EMBL)MIR5090
ZODIACMIR5090
Ontologies - Pathways
Huge Navigator MIR5090 [HugePedia]
snp3D : Map Gene to Disease100847073
BioCentury BCIQMIR5090
ClinGenMIR5090
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847073
Clinical trialMIR5090
Miscellaneous
canSAR (ICR)MIR5090 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5090
EVEXMIR5090
GoPubMedMIR5090
iHOPMIR5090
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:16:38 CET 2017

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