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MIR5100 (microRNA 5100)

Identity

Alias (NCBI)-
HGNC (Hugo) MIR5100
HGNC Alias symbhsa-mir-5100
LocusID (NCBI) 100847014
Atlas_Id 55301
Location 10q11.21  [Link to chromosome band 10q11]
Location_base_pair Starts at 42997563 and ends at 42997681 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR5100   43540
Cards
Entrez_Gene (NCBI)MIR5100    microRNA 5100
Aliases
GeneCards (Weizmann)MIR5100
Ensembl hg19 (Hinxton)ENSG00000263795 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000263795 [Gene_View]  ENSG00000263795 [Sequence]  chr10:42997563-42997681 [Contig_View]  MIR5100 [Vega]
ICGC DataPortalENSG00000263795
TCGA cBioPortalMIR5100
AceView (NCBI)MIR5100
Genatlas (Paris)MIR5100
SOURCE (Princeton)MIR5100
Genetics Home Reference (NIH)MIR5100
miRBaseMIR5100
dbDEMCMIR5100
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5100  -     chr10:42997563-42997681 +  10q11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5100  -     10q11.21   [Description]    (hg19-Feb_2009)
GoldenPathMIR5100 - 10q11.21 [CytoView hg19]  MIR5100 - 10q11.21 [CytoView hg38]
ImmunoBaseENSG00000263795
Genome Data Viewer NCBIMIR5100 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5100
Gene ExpressionMIR5100 [ NCBI-GEO ]   MIR5100 [ EBI - ARRAY_EXPRESS ]   MIR5100 [ SEEK ]   MIR5100 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5100 [ Firebrowse - Broad ]
GenevisibleExpression of MIR5100 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100847014
GTEX Portal (Tissue expression)MIR5100
Human Protein AtlasENSG00000263795-MIR5100 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5100
Human Protein Atlas [tissue]ENSG00000263795-MIR5100 [tissue]
Protein Interaction databases
BioGRIDMIR5100
STRING (EMBL)MIR5100
ZODIACMIR5100
Ontologies - Pathways
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMIR5100
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:20:07 CEST 2021

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