Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR516A2 (microRNA 516a-2)

Identity

Alias_namesMIRN516-2
MIRN516A2
microRNA 516-2
Alias_symbol (synonym)hsa-mir-516-2
hsa-mir-516a-2
Other aliasMIRN516A-2
mir-516a-2
HGNC (Hugo) MIR516A2
LocusID (NCBI) 574499
Atlas_Id 56360
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53761133 and ends at 53761222 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR516A2   32131
Cards
Entrez_Gene (NCBI)MIR516A2  574499  microRNA 516a-2
AliasesMIRN516-2; MIRN516A-2; MIRN516A2; mir-516a-2
GeneCards (Weizmann)MIR516A2
Ensembl hg19 (Hinxton)ENSG00000207620 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207620 [Gene_View]  chr19:53761133-53761222 [Contig_View]  MIR516A2 [Vega]
ICGC DataPortalENSG00000207620
TCGA cBioPortalMIR516A2
AceView (NCBI)MIR516A2
Genatlas (Paris)MIR516A2
WikiGenes574499
SOURCE (Princeton)MIR516A2
Genetics Home Reference (NIH)MIR516A2
miRBaseMIR516A2
dbDEMCMIR516A2
Genomic and cartography
GoldenPath hg38 (UCSC)MIR516A2  -     chr19:53761133-53761222 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR516A2  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblMIR516A2 - 19q13.42 [CytoView hg19]  MIR516A2 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIMIR516A2 [Mapview hg19]  MIR516A2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609495
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR516A2
Alternative Splicing GalleryENSG00000207620
Gene ExpressionMIR516A2 [ NCBI-GEO ]   MIR516A2 [ EBI - ARRAY_EXPRESS ]   MIR516A2 [ SEEK ]   MIR516A2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR516A2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)574499
GTEX Portal (Tissue expression)MIR516A2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR516A2
DMDM Disease mutations574499
Blocks (Seattle)MIR516A2
Human Protein AtlasENSG00000207620
Protein Interaction databases
FunCoupENSG00000207620
BioGRIDMIR516A2
STRING (EMBL)MIR516A2
ZODIACMIR516A2
Ontologies - Pathways
Huge Navigator MIR516A2 [HugePedia]
snp3D : Map Gene to Disease574499
BioCentury BCIQMIR516A2
ClinGenMIR516A2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574499
Chemical/Pharm GKB GenePA164722773
Clinical trialMIR516A2
Miscellaneous
canSAR (ICR)MIR516A2 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR516A2
EVEXMIR516A2
GoPubMedMIR516A2
iHOPMIR516A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:19:31 CEST 2017

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