Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR517C (microRNA 517c)

Identity

Alias_namesMIRN517C
Alias_symbol (synonym)hsa-mir-517c
Other alias
HGNC (Hugo) MIR517C
LocusID (NCBI) 574492
Atlas_Id 51244
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 54244567 and ends at 54244661 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR517C   32124
Cards
Entrez_Gene (NCBI)MIR517C  574492  microRNA 517c
AliasesMIRN517C
GeneCards (Weizmann)MIR517C
Ensembl hg19 (Hinxton)ENSG00000207838 [Gene_View]  chr19:54244567-54244661 [Contig_View]  MIR517C [Vega]
Ensembl hg38 (Hinxton)ENSG00000207838 [Gene_View]  chr19:54244567-54244661 [Contig_View]  MIR517C [Vega]
ICGC DataPortalENSG00000207838
TCGA cBioPortalMIR517C
AceView (NCBI)MIR517C
Genatlas (Paris)MIR517C
WikiGenes574492
SOURCE (Princeton)MIR517C
Genetics Home Reference (NIH)MIR517C
miRBaseMIR517C
dbDEMCMIR517C
Genomic and cartography
GoldenPath hg19 (UCSC)MIR517C  -     chr19:54244567-54244661 +  19q13.42   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR517C  -     19q13.42   [Description]    (hg38-Dec_2013)
EnsemblMIR517C - 19q13.42 [CytoView hg19]  MIR517C - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIMIR517C [Mapview hg19]  MIR517C [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY785929
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000019 NC_018930 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)MIR517C
Alternative Splicing GalleryENSG00000207838
Gene ExpressionMIR517C [ NCBI-GEO ]   MIR517C [ EBI - ARRAY_EXPRESS ]   MIR517C [ SEEK ]   MIR517C [ MEM ]
Gene Expression Viewer (FireBrowse)MIR517C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)574492
GTEX Portal (Tissue expression)MIR517C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR517C
DMDM Disease mutations574492
Blocks (Seattle)MIR517C
Human Protein AtlasENSG00000207838
Protein Interaction databases
FunCoupENSG00000207838
BioGRIDMIR517C
STRING (EMBL)MIR517C
ZODIACMIR517C
Ontologies - Pathways
Huge Navigator MIR517C [HugePedia]
snp3D : Map Gene to Disease574492
BioCentury BCIQMIR517C
ClinGenMIR517C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574492
Chemical/Pharm GKB GenePA164722778
Clinical trialMIR517C
Miscellaneous
canSAR (ICR)MIR517C (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR517C
EVEXMIR517C
GoPubMedMIR517C
iHOPMIR517C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:16:26 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.