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MIR5187 (microRNA 5187)

Identity

Alias_symbol (synonym)hsa-mir-5187
Other aliasmir-5187
HGNC (Hugo) MIR5187
LocusID (NCBI) 100847090
Atlas_Id 69764
Location 1q23.3  [Link to chromosome band 1q23]
Location_base_pair Starts at 161227186 and ends at 161227261 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5187   43523
Cards
Entrez_Gene (NCBI)MIR5187  100847090  microRNA 5187
Aliasesmir-5187
GeneCards (Weizmann)MIR5187
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:161227186-161227261 [Contig_View]  MIR5187 [Vega]
TCGA cBioPortalMIR5187
AceView (NCBI)MIR5187
Genatlas (Paris)MIR5187
WikiGenes100847090
SOURCE (Princeton)MIR5187
Genetics Home Reference (NIH)MIR5187
miRBaseMIR5187
dbDEMCMIR5187
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5187  -     chr1:161227186-161227261 +  1q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5187  -     1q23.3   [Description]    (hg19-Feb_2009)
EnsemblMIR5187 - 1q23.3 [CytoView hg19]  MIR5187 - 1q23.3 [CytoView hg38]
Mapping of homologs : NCBIMIR5187 [Mapview hg19]  MIR5187 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611538
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5187
Gene ExpressionMIR5187 [ NCBI-GEO ]   MIR5187 [ EBI - ARRAY_EXPRESS ]   MIR5187 [ SEEK ]   MIR5187 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5187 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847090
GTEX Portal (Tissue expression)MIR5187
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5187
DMDM Disease mutations100847090
Blocks (Seattle)MIR5187
Protein Interaction databases
BioGRIDMIR5187
STRING (EMBL)MIR5187
ZODIACMIR5187
Ontologies - Pathways
Huge Navigator MIR5187 [HugePedia]
snp3D : Map Gene to Disease100847090
BioCentury BCIQMIR5187
ClinGenMIR5187
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847090
Clinical trialMIR5187
Miscellaneous
canSAR (ICR)MIR5187 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5187
EVEXMIR5187
GoPubMedMIR5187
iHOPMIR5187
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:15:32 CET 2017

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