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MIR5193 (microRNA 5193)

Identity

Alias_symbol (synonym)hsa-mir-5193
Other aliasmir-5193
HGNC (Hugo) MIR5193
LocusID (NCBI) 100847079
Atlas_Id 69776
Location 3p21.31  [Link to chromosome band 3p21]
Location_base_pair Starts at 49806137 and ends at 49806245 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR5193   43534
Cards
Entrez_Gene (NCBI)MIR5193  100847079  microRNA 5193
Aliasesmir-5193
GeneCards (Weizmann)MIR5193
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:49806137-49806245 [Contig_View]  MIR5193 [Vega]
TCGA cBioPortalMIR5193
AceView (NCBI)MIR5193
Genatlas (Paris)MIR5193
WikiGenes100847079
SOURCE (Princeton)MIR5193
Genetics Home Reference (NIH)MIR5193
miRBaseMIR5193
dbDEMCMIR5193
Genomic and cartography
GoldenPath hg38 (UCSC)MIR5193  -     chr3:49806137-49806245 -  3p21.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR5193  -     3p21.31   [Description]    (hg19-Feb_2009)
EnsemblMIR5193 - 3p21.31 [CytoView hg19]  MIR5193 - 3p21.31 [CytoView hg38]
Mapping of homologs : NCBIMIR5193 [Mapview hg19]  MIR5193 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM611541
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR5193
Gene ExpressionMIR5193 [ NCBI-GEO ]   MIR5193 [ EBI - ARRAY_EXPRESS ]   MIR5193 [ SEEK ]   MIR5193 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR5193 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847079
GTEX Portal (Tissue expression)MIR5193
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR5193
DMDM Disease mutations100847079
Blocks (Seattle)MIR5193
Protein Interaction databases
BioGRIDMIR5193
STRING (EMBL)MIR5193
ZODIACMIR5193
Ontologies - Pathways
Huge Navigator MIR5193 [HugePedia]
snp3D : Map Gene to Disease100847079
BioCentury BCIQMIR5193
ClinGenMIR5193
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847079
Clinical trialMIR5193
Miscellaneous
canSAR (ICR)MIR5193 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR5193
EVEXMIR5193
GoPubMedMIR5193
iHOPMIR5193
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:08:24 CET 2017

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