Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR520A (microRNA 520a)

Identity

Alias_namesMIRN520A
Alias_symbol (synonym)hsa-mir-520a
Other alias
HGNC (Hugo) MIR520A
LocusID (NCBI) 574467
Atlas_Id 55586
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53690881 and ends at 53690965 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR520A   32099
Cards
Entrez_Gene (NCBI)MIR520A  574467  microRNA 520a
AliasesMIRN520A
GeneCards (Weizmann)MIR520A
Ensembl hg19 (Hinxton)ENSG00000207594 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207594 [Gene_View]  chr19:53690881-53690965 [Contig_View]  MIR520A [Vega]
ICGC DataPortalENSG00000207594
TCGA cBioPortalMIR520A
AceView (NCBI)MIR520A
Genatlas (Paris)MIR520A
WikiGenes574467
SOURCE (Princeton)MIR520A
Genetics Home Reference (NIH)MIR520A
miRBaseMIR520A
dbDEMCMIR520A
Genomic and cartography
GoldenPath hg38 (UCSC)MIR520A  -     chr19:53690881-53690965 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR520A  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblMIR520A - 19q13.42 [CytoView hg19]  MIR520A - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIMIR520A [Mapview hg19]  MIR520A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY785926 AY882292
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR520A
Alternative Splicing GalleryENSG00000207594
Gene ExpressionMIR520A [ NCBI-GEO ]   MIR520A [ EBI - ARRAY_EXPRESS ]   MIR520A [ SEEK ]   MIR520A [ MEM ]
Gene Expression Viewer (FireBrowse)MIR520A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)574467
GTEX Portal (Tissue expression)MIR520A
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR520A
DMDM Disease mutations574467
Blocks (Seattle)MIR520A
Human Protein AtlasENSG00000207594
Protein Interaction databases
FunCoupENSG00000207594
BioGRIDMIR520A
STRING (EMBL)MIR520A
ZODIACMIR520A
Ontologies - Pathways
Huge Navigator MIR520A [HugePedia]
snp3D : Map Gene to Disease574467
BioCentury BCIQMIR520A
ClinGenMIR520A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574467
Chemical/Pharm GKB GenePA164722792
Clinical trialMIR520A
Miscellaneous
canSAR (ICR)MIR520A (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR520A
EVEXMIR520A
GoPubMedMIR520A
iHOPMIR520A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 14:00:04 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.