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MIR520B (microRNA 520b)

Identity

Alias_namesMIRN520B
Alias_symbol (synonym)hsa-mir-520b
Other alias
HGNC (Hugo) MIR520B
LocusID (NCBI) 574473
Atlas_Id 52283
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53701227 and ends at 53701287 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR520B   32105
Cards
Entrez_Gene (NCBI)MIR520B  574473  microRNA 520b
AliasesMIRN520B
GeneCards (Weizmann)MIR520B
Ensembl hg19 (Hinxton)ENSG00000207722 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207722 [Gene_View]  ENSG00000207722 [Sequence]  chr19:53701227-53701287 [Contig_View]  MIR520B [Vega]
ICGC DataPortalENSG00000207722
TCGA cBioPortalMIR520B
AceView (NCBI)MIR520B
Genatlas (Paris)MIR520B
WikiGenes574473
SOURCE (Princeton)MIR520B
Genetics Home Reference (NIH)MIR520B
miRBaseMIR520B
dbDEMCMIR520B
Genomic and cartography
GoldenPath hg38 (UCSC)MIR520B  -     chr19:53701227-53701287 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR520B  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblMIR520B - 19q13.42 [CytoView hg19]  MIR520B - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIMIR520B [Mapview hg19]  MIR520B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY785927 AY882300
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR520B
Alternative Splicing GalleryENSG00000207722
Gene ExpressionMIR520B [ NCBI-GEO ]   MIR520B [ EBI - ARRAY_EXPRESS ]   MIR520B [ SEEK ]   MIR520B [ MEM ]
Gene Expression Viewer (FireBrowse)MIR520B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)574473
GTEX Portal (Tissue expression)MIR520B
Human Protein AtlasENSG00000207722-MIR520B [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR520B
DMDM Disease mutations574473
Blocks (Seattle)MIR520B
Human Protein Atlas [tissue]ENSG00000207722-MIR520B [tissue]
Protein Interaction databases
FunCoupENSG00000207722
BioGRIDMIR520B
STRING (EMBL)MIR520B
ZODIACMIR520B
Ontologies - Pathways
Huge Navigator MIR520B [HugePedia]
snp3D : Map Gene to Disease574473
BioCentury BCIQMIR520B
ClinGenMIR520B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574473
Chemical/Pharm GKB GenePA164722793
Clinical trialMIR520B
Miscellaneous
canSAR (ICR)MIR520B (select the gene name)
DataMed IndexMIR520B
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR520B
EVEXMIR520B
GoPubMedMIR520B
iHOPMIR520B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Jan 17 18:24:55 CET 2019

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