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MIR520C (microRNA 520c)

Identity

Alias (NCBI)MIRN520C
HGNC (Hugo) MIR520C
HGNC Alias symbhsa-mir-520c
HGNC Previous nameMIRN520C
LocusID (NCBI) 574476
Atlas_Id 53116
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53707453 and ends at 53707539 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR520C   32108
Cards
Entrez_Gene (NCBI)MIR520C    microRNA 520c
AliasesMIRN520C
GeneCards (Weizmann)MIR520C
Ensembl hg19 (Hinxton)ENSG00000207738 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207738 [Gene_View]  ENSG00000207738 [Sequence]  chr19:53707453-53707539 [Contig_View]  MIR520C [Vega]
ICGC DataPortalENSG00000207738
TCGA cBioPortalMIR520C
AceView (NCBI)MIR520C
Genatlas (Paris)MIR520C
SOURCE (Princeton)MIR520C
Genetics Home Reference (NIH)MIR520C
miRBaseMIR520C
dbDEMCMIR520C
Genomic and cartography
GoldenPath hg38 (UCSC)MIR520C  -     chr19:53707453-53707539 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR520C  -     19q13.42   [Description]    (hg19-Feb_2009)
GoldenPathMIR520C - 19q13.42 [CytoView hg19]  MIR520C - 19q13.42 [CytoView hg38]
ImmunoBaseENSG00000207738
Genome Data Viewer NCBIMIR520C [Mapview hg19]  
OMIM615908   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR520C
Gene ExpressionMIR520C [ NCBI-GEO ]   MIR520C [ EBI - ARRAY_EXPRESS ]   MIR520C [ SEEK ]   MIR520C [ MEM ]
Gene Expression Viewer (FireBrowse)MIR520C [ Firebrowse - Broad ]
GenevisibleExpression of MIR520C in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)574476
GTEX Portal (Tissue expression)MIR520C
Human Protein AtlasENSG00000207738-MIR520C [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR520C
Human Protein Atlas [tissue]ENSG00000207738-MIR520C [tissue]
Protein Interaction databases
BioGRIDMIR520C
STRING (EMBL)MIR520C
ZODIACMIR520C
Ontologies - Pathways
Litterature
PubMed18 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMIR520C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:20:13 CEST 2021

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