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MIR520D (microRNA 520d)

Identity

Alias_namesMIRN520D
Alias_symbol (synonym)hsa-mir-520d
Other alias
HGNC (Hugo) MIR520D
LocusID (NCBI) 574482
Atlas_Id 54921
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53720096 and ends at 53720182 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR520D   32114
Cards
Entrez_Gene (NCBI)MIR520D  574482  microRNA 520d
AliasesMIRN520D
GeneCards (Weizmann)MIR520D
Ensembl hg19 (Hinxton)ENSG00000207735 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207735 [Gene_View]  chr19:53720096-53720182 [Contig_View]  MIR520D [Vega]
ICGC DataPortalENSG00000207735
TCGA cBioPortalMIR520D
AceView (NCBI)MIR520D
Genatlas (Paris)MIR520D
WikiGenes574482
SOURCE (Princeton)MIR520D
Genetics Home Reference (NIH)MIR520D
miRBaseMIR520D
dbDEMCMIR520D
Genomic and cartography
GoldenPath hg38 (UCSC)MIR520D  -     chr19:53720096-53720182 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR520D  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblMIR520D - 19q13.42 [CytoView hg19]  MIR520D - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIMIR520D [Mapview hg19]  MIR520D [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY785937
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR520D
Alternative Splicing GalleryENSG00000207735
Gene ExpressionMIR520D [ NCBI-GEO ]   MIR520D [ EBI - ARRAY_EXPRESS ]   MIR520D [ SEEK ]   MIR520D [ MEM ]
Gene Expression Viewer (FireBrowse)MIR520D [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)574482
GTEX Portal (Tissue expression)MIR520D
Human Protein AtlasENSG00000207735-MIR520D [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR520D
DMDM Disease mutations574482
Blocks (Seattle)MIR520D
Human Protein Atlas [tissue]ENSG00000207735-MIR520D [tissue]
Protein Interaction databases
FunCoupENSG00000207735
BioGRIDMIR520D
STRING (EMBL)MIR520D
ZODIACMIR520D
Ontologies - Pathways
Huge Navigator MIR520D [HugePedia]
snp3D : Map Gene to Disease574482
BioCentury BCIQMIR520D
ClinGenMIR520D
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574482
Chemical/Pharm GKB GenePA164722795
Clinical trialMIR520D
Miscellaneous
canSAR (ICR)MIR520D (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR520D
EVEXMIR520D
GoPubMedMIR520D
iHOPMIR520D
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:23:50 CET 2017

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