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MIR520E (microRNA 520e)

Identity

Alias_namesMIRN520E
Alias_symbol (synonym)hsa-mir-520e
Other alias
HGNC (Hugo) MIR520E
LocusID (NCBI) 574461
Atlas_Id 52929
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53675711 and ends at 53675797 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR520E   32093
Cards
Entrez_Gene (NCBI)MIR520E  574461  microRNA 520e
AliasesMIRN520E
GeneCards (Weizmann)MIR520E
Ensembl hg19 (Hinxton)ENSG00000207599 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207599 [Gene_View]  chr19:53675711-53675797 [Contig_View]  MIR520E [Vega]
ICGC DataPortalENSG00000207599
TCGA cBioPortalMIR520E
AceView (NCBI)MIR520E
Genatlas (Paris)MIR520E
WikiGenes574461
SOURCE (Princeton)MIR520E
Genetics Home Reference (NIH)MIR520E
miRBaseMIR520E
dbDEMCMIR520E
Genomic and cartography
GoldenPath hg38 (UCSC)MIR520E  -     chr19:53675711-53675797 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR520E  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblMIR520E - 19q13.42 [CytoView hg19]  MIR520E - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIMIR520E [Mapview hg19]  MIR520E [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY882267
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR520E
Alternative Splicing GalleryENSG00000207599
Gene ExpressionMIR520E [ NCBI-GEO ]   MIR520E [ EBI - ARRAY_EXPRESS ]   MIR520E [ SEEK ]   MIR520E [ MEM ]
Gene Expression Viewer (FireBrowse)MIR520E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)574461
GTEX Portal (Tissue expression)MIR520E
Human Protein AtlasENSG00000207599-MIR520E [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR520E
DMDM Disease mutations574461
Blocks (Seattle)MIR520E
Human Protein Atlas [tissue]ENSG00000207599-MIR520E [tissue]
Protein Interaction databases
FunCoupENSG00000207599
BioGRIDMIR520E
STRING (EMBL)MIR520E
ZODIACMIR520E
Ontologies - Pathways
Huge Navigator MIR520E [HugePedia]
snp3D : Map Gene to Disease574461
BioCentury BCIQMIR520E
ClinGenMIR520E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574461
Chemical/Pharm GKB GenePA164722796
Clinical trialMIR520E
Miscellaneous
canSAR (ICR)MIR520E (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR520E
EVEXMIR520E
GoPubMedMIR520E
iHOPMIR520E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:23:50 CET 2017

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