Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR526A1 (microRNA 526a-1)

Identity

Alias_namesMIRN526A-1
MIRN526A1
Alias_symbol (synonym)hsa-mir-526a-1
Other alias
HGNC (Hugo) MIR526A1
LocusID (NCBI) 574475
Atlas_Id 55806
Location 19q13.42  [Link to chromosome band 19q13]
Location_base_pair Starts at 53706252 and ends at 53706336 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR526A1   32107
Cards
Entrez_Gene (NCBI)MIR526A1  574475  microRNA 526a-1
AliasesMIRN526A-1; MIRN526A1
GeneCards (Weizmann)MIR526A1
Ensembl hg19 (Hinxton)ENSG00000207629 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207629 [Gene_View]  chr19:53706252-53706336 [Contig_View]  MIR526A1 [Vega]
ICGC DataPortalENSG00000207629
TCGA cBioPortalMIR526A1
AceView (NCBI)MIR526A1
Genatlas (Paris)MIR526A1
WikiGenes574475
SOURCE (Princeton)MIR526A1
Genetics Home Reference (NIH)MIR526A1
miRBaseMIR526A1
dbDEMCMIR526A1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR526A1  -     chr19:53706252-53706336 +  19q13.42   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR526A1  -     19q13.42   [Description]    (hg19-Feb_2009)
EnsemblMIR526A1 - 19q13.42 [CytoView hg19]  MIR526A1 - 19q13.42 [CytoView hg38]
Mapping of homologs : NCBIMIR526A1 [Mapview hg19]  MIR526A1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AY882336
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR526A1
Alternative Splicing GalleryENSG00000207629
Gene ExpressionMIR526A1 [ NCBI-GEO ]   MIR526A1 [ EBI - ARRAY_EXPRESS ]   MIR526A1 [ SEEK ]   MIR526A1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR526A1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)574475
GTEX Portal (Tissue expression)MIR526A1
Human Protein AtlasENSG00000207629-MIR526A1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR526A1
DMDM Disease mutations574475
Blocks (Seattle)MIR526A1
Human Protein Atlas [tissue]ENSG00000207629-MIR526A1 [tissue]
Protein Interaction databases
FunCoupENSG00000207629
BioGRIDMIR526A1
STRING (EMBL)MIR526A1
ZODIACMIR526A1
Ontologies - Pathways
Huge Navigator MIR526A1 [HugePedia]
snp3D : Map Gene to Disease574475
BioCentury BCIQMIR526A1
ClinGenMIR526A1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD574475
Chemical/Pharm GKB GenePA164722806
Clinical trialMIR526A1
Miscellaneous
canSAR (ICR)MIR526A1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR526A1
EVEXMIR526A1
GoPubMedMIR526A1
iHOPMIR526A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:23:51 CET 2017

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