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MIR541 (microRNA 541)

Identity

Alias_namesMIRN541
Alias_symbol (synonym)hsa-mir-541
Other aliasmir-541
HGNC (Hugo) MIR541
LocusID (NCBI) 100126308
Atlas_Id 55622
Location 14q32.31  [Link to chromosome band 14q32]
Location_base_pair Starts at 101064495 and ends at 101064578 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR541   33650
Cards
Entrez_Gene (NCBI)MIR541  100126308  microRNA 541
AliasesMIRN541; hsa-mir-541; mir-541
GeneCards (Weizmann)MIR541
Ensembl hg19 (Hinxton)ENSG00000216179 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000216179 [Gene_View]  chr14:101064495-101064578 [Contig_View]  MIR541 [Vega]
ICGC DataPortalENSG00000216179
TCGA cBioPortalMIR541
AceView (NCBI)MIR541
Genatlas (Paris)MIR541
WikiGenes100126308
SOURCE (Princeton)MIR541
Genetics Home Reference (NIH)MIR541
miRBaseMIR541
dbDEMCMIR541
Genomic and cartography
GoldenPath hg38 (UCSC)MIR541  -     chr14:101064495-101064578 +  14q32.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR541  -     14q32.31   [Description]    (hg19-Feb_2009)
EnsemblMIR541 - 14q32.31 [CytoView hg19]  MIR541 - 14q32.31 [CytoView hg38]
Mapping of homologs : NCBIMIR541 [Mapview hg19]  MIR541 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609947
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR541
Alternative Splicing GalleryENSG00000216179
Gene ExpressionMIR541 [ NCBI-GEO ]   MIR541 [ EBI - ARRAY_EXPRESS ]   MIR541 [ SEEK ]   MIR541 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR541 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100126308
GTEX Portal (Tissue expression)MIR541
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR541
DMDM Disease mutations100126308
Blocks (Seattle)MIR541
Human Protein AtlasENSG00000216179
Protein Interaction databases
FunCoupENSG00000216179
BioGRIDMIR541
STRING (EMBL)MIR541
ZODIACMIR541
Ontologies - Pathways
Huge Navigator MIR541 [HugePedia]
snp3D : Map Gene to Disease100126308
BioCentury BCIQMIR541
ClinGenMIR541
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100126308
Chemical/Pharm GKB GenePA164722812
Clinical trialMIR541
Miscellaneous
canSAR (ICR)MIR541 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR541
EVEXMIR541
GoPubMedMIR541
iHOPMIR541
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 25 19:19:37 CEST 2017

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