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MIR548AA1 (microRNA 548aa-1)

Identity

Alias_symbol (synonym)hsa-mir-548aa-1
Other alias-
HGNC (Hugo) MIR548AA1
LocusID (NCBI) 100500863
Atlas_Id 69799
Location 1p21.2  [Link to chromosome band 1p21]
Location_base_pair Starts at 100154611 and ends at 100178513 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548AA1   38944
Cards
Entrez_Gene (NCBI)MIR548AA1  100500863  microRNA 548aa-1
Aliases
GeneCards (Weizmann)MIR548AA1
Ensembl hg19 (Hinxton)ENSG00000207704 [Gene_View]  chr1:100154611-100178513 [Contig_View]  MIR548AA1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000207704 [Gene_View]  chr1:100154611-100178513 [Contig_View]  MIR548AA1 [Vega]
ICGC DataPortalENSG00000207704
TCGA cBioPortalMIR548AA1
AceView (NCBI)MIR548AA1
Genatlas (Paris)MIR548AA1
WikiGenes100500863
SOURCE (Princeton)MIR548AA1
Genetics Home Reference (NIH)MIR548AA1
miRBaseMIR548AA1
dbDEMCMIR548AA1
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548AA1  -     chr1:100154611-100178513 +  1p21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548AA1  -     1p21.2   [Description]    (hg38-Dec_2013)
EnsemblMIR548AA1 - 1p21.2 [CytoView hg19]  MIR548AA1 - 1p21.2 [CytoView hg38]
Mapping of homologs : NCBIMIR548AA1 [Mapview hg19]  MIR548AA1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)MIR548AA1
Alternative Splicing GalleryENSG00000207704
Gene ExpressionMIR548AA1 [ NCBI-GEO ]   MIR548AA1 [ EBI - ARRAY_EXPRESS ]   MIR548AA1 [ SEEK ]   MIR548AA1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548AA1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100500863
GTEX Portal (Tissue expression)MIR548AA1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548AA1
DMDM Disease mutations100500863
Blocks (Seattle)MIR548AA1
Human Protein AtlasENSG00000207704
Protein Interaction databases
FunCoupENSG00000207704
BioGRIDMIR548AA1
STRING (EMBL)MIR548AA1
ZODIACMIR548AA1
Ontologies - Pathways
Huge Navigator MIR548AA1 [HugePedia]
snp3D : Map Gene to Disease100500863
BioCentury BCIQMIR548AA1
ClinGenMIR548AA1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100500863
Clinical trialMIR548AA1
Miscellaneous
canSAR (ICR)MIR548AA1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548AA1
EVEXMIR548AA1
GoPubMedMIR548AA1
iHOPMIR548AA1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:31:22 CET 2017

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