Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR548AA2 (microRNA 548aa-2)

Identity

Alias_symbol (synonym)hsa-mir-548aa-2
Other alias-
HGNC (Hugo) MIR548AA2
LocusID (NCBI) 100500895
Atlas_Id 69800
Location 16p12.2  [Link to chromosome band 16p12]
Location_base_pair Starts at 22729603 and ends at 22803363 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548AA2   38921
Cards
Entrez_Gene (NCBI)MIR548AA2  100500895  microRNA 548aa-2
Aliases
GeneCards (Weizmann)MIR548AA2
Ensembl hg19 (Hinxton) [Gene_View]  chr16:22729603-22803363 [Contig_View]  MIR548AA2 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:22729603-22803363 [Contig_View]  MIR548AA2 [Vega]
TCGA cBioPortalMIR548AA2
AceView (NCBI)MIR548AA2
Genatlas (Paris)MIR548AA2
WikiGenes100500895
SOURCE (Princeton)MIR548AA2
Genetics Home Reference (NIH)MIR548AA2
miRBaseMIR548AA2
dbDEMCMIR548AA2
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548AA2  -     chr16:22729603-22803363 -  16p12.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548AA2  -     16p12.2   [Description]    (hg38-Dec_2013)
EnsemblMIR548AA2 - 16p12.2 [CytoView hg19]  MIR548AA2 - 16p12.2 [CytoView hg38]
Mapping of homologs : NCBIMIR548AA2 [Mapview hg19]  MIR548AA2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)MIR548AA2
Gene ExpressionMIR548AA2 [ NCBI-GEO ]   MIR548AA2 [ EBI - ARRAY_EXPRESS ]   MIR548AA2 [ SEEK ]   MIR548AA2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548AA2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100500895
GTEX Portal (Tissue expression)MIR548AA2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548AA2
DMDM Disease mutations100500895
Blocks (Seattle)MIR548AA2
Protein Interaction databases
BioGRIDMIR548AA2
STRING (EMBL)MIR548AA2
ZODIACMIR548AA2
Ontologies - Pathways
Huge Navigator MIR548AA2 [HugePedia]
snp3D : Map Gene to Disease100500895
BioCentury BCIQMIR548AA2
ClinGenMIR548AA2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100500895
Clinical trialMIR548AA2
Miscellaneous
canSAR (ICR)MIR548AA2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548AA2
EVEXMIR548AA2
GoPubMedMIR548AA2
iHOPMIR548AA2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:31:22 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.