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MIR548AC (microRNA 548ac)

Identity

Alias_symbol (synonym)hsa-mir-548ac
Other alias-
HGNC (Hugo) MIR548AC
LocusID (NCBI) 100616384
Atlas_Id 69801
Location 1p13.1  [Link to chromosome band 1p13]
Location_base_pair Starts at 116560024 and ends at 116560111 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548AC   41626
Cards
Entrez_Gene (NCBI)MIR548AC  100616384  microRNA 548ac
Aliases
GeneCards (Weizmann)MIR548AC
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:116560024-116560111 [Contig_View]  MIR548AC [Vega]
TCGA cBioPortalMIR548AC
AceView (NCBI)MIR548AC
Genatlas (Paris)MIR548AC
WikiGenes100616384
SOURCE (Princeton)MIR548AC
Genetics Home Reference (NIH)MIR548AC
miRBaseMIR548AC
dbDEMCMIR548AC
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548AC  -     chr1:116560024-116560111 -  1p13.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548AC  -     1p13.1   [Description]    (hg19-Feb_2009)
EnsemblMIR548AC - 1p13.1 [CytoView hg19]  MIR548AC - 1p13.1 [CytoView hg38]
Mapping of homologs : NCBIMIR548AC [Mapview hg19]  MIR548AC [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548AC
Gene ExpressionMIR548AC [ NCBI-GEO ]   MIR548AC [ EBI - ARRAY_EXPRESS ]   MIR548AC [ SEEK ]   MIR548AC [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548AC [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616384
GTEX Portal (Tissue expression)MIR548AC
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548AC
DMDM Disease mutations100616384
Blocks (Seattle)MIR548AC
Protein Interaction databases
BioGRIDMIR548AC
STRING (EMBL)MIR548AC
ZODIACMIR548AC
Ontologies - Pathways
Huge Navigator MIR548AC [HugePedia]
snp3D : Map Gene to Disease100616384
BioCentury BCIQMIR548AC
ClinGenMIR548AC
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616384
Clinical trialMIR548AC
Miscellaneous
canSAR (ICR)MIR548AC (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548AC
EVEXMIR548AC
GoPubMedMIR548AC
iHOPMIR548AC
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:15:37 CET 2017

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