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MIR548AD (microRNA 548ad)

Identity

Alias_symbol (synonym)hsa-mir-548ad
Other alias-
HGNC (Hugo) MIR548AD
LocusID (NCBI) 100616475
Atlas_Id 69802
Location 2p22.3  [Link to chromosome band 2p22]
Location_base_pair Starts at 35471405 and ends at 35471486 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548AD   41683
Cards
Entrez_Gene (NCBI)MIR548AD  100616475  microRNA 548ad
Aliases
GeneCards (Weizmann)MIR548AD
Ensembl hg19 (Hinxton)ENSG00000265301 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265301 [Gene_View]  chr2:35471405-35471486 [Contig_View]  MIR548AD [Vega]
ICGC DataPortalENSG00000265301
TCGA cBioPortalMIR548AD
AceView (NCBI)MIR548AD
Genatlas (Paris)MIR548AD
WikiGenes100616475
SOURCE (Princeton)MIR548AD
Genetics Home Reference (NIH)MIR548AD
miRBaseMIR548AD
dbDEMCMIR548AD
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548AD  -     chr2:35471405-35471486 +  2p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548AD  -     2p22.3   [Description]    (hg19-Feb_2009)
EnsemblMIR548AD - 2p22.3 [CytoView hg19]  MIR548AD - 2p22.3 [CytoView hg38]
Mapping of homologs : NCBIMIR548AD [Mapview hg19]  MIR548AD [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548AD
Alternative Splicing GalleryENSG00000265301
Gene ExpressionMIR548AD [ NCBI-GEO ]   MIR548AD [ EBI - ARRAY_EXPRESS ]   MIR548AD [ SEEK ]   MIR548AD [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548AD [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616475
GTEX Portal (Tissue expression)MIR548AD
Human Protein AtlasENSG00000265301-MIR548AD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548AD
DMDM Disease mutations100616475
Blocks (Seattle)MIR548AD
Human Protein Atlas [tissue]ENSG00000265301-MIR548AD [tissue]
Protein Interaction databases
FunCoupENSG00000265301
BioGRIDMIR548AD
STRING (EMBL)MIR548AD
ZODIACMIR548AD
Ontologies - Pathways
Huge Navigator MIR548AD [HugePedia]
snp3D : Map Gene to Disease100616475
BioCentury BCIQMIR548AD
ClinGenMIR548AD
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616475
Clinical trialMIR548AD
Miscellaneous
canSAR (ICR)MIR548AD (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548AD
EVEXMIR548AD
GoPubMedMIR548AD
iHOPMIR548AD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:05:40 CET 2017

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