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MIR548AI (microRNA 548ai)

Identity

Alias_symbol (synonym)hsa-mir-548ai
Other alias-
HGNC (Hugo) MIR548AI
LocusID (NCBI) 100616347
Atlas_Id 69804
Location 16q12.1  [Link to chromosome band 16q12]
Location_base_pair Starts at 50878773 and ends at 51409868 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
AUTS2 (7q11.22) / MIR548AI (14q12)SND1 (7q32.1) / MIR548AI (14q12)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548AI   41854
Cards
Entrez_Gene (NCBI)MIR548AI  100616347  microRNA 548ai
Aliases
GeneCards (Weizmann)MIR548AI
Ensembl hg19 (Hinxton)ENSG00000265226 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000265226 [Gene_View]  chr16:50878773-51409868 [Contig_View]  MIR548AI [Vega]
ICGC DataPortalENSG00000265226
TCGA cBioPortalMIR548AI
AceView (NCBI)MIR548AI
Genatlas (Paris)MIR548AI
WikiGenes100616347
SOURCE (Princeton)MIR548AI
Genetics Home Reference (NIH)MIR548AI
miRBaseMIR548AI
dbDEMCMIR548AI
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548AI  -     chr16:50878773-51409868 +  16q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548AI  -     16q12.1   [Description]    (hg19-Feb_2009)
EnsemblMIR548AI - 16q12.1 [CytoView hg19]  MIR548AI - 16q12.1 [CytoView hg38]
Mapping of homologs : NCBIMIR548AI [Mapview hg19]  MIR548AI [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548AI
Alternative Splicing GalleryENSG00000265226
Gene ExpressionMIR548AI [ NCBI-GEO ]   MIR548AI [ EBI - ARRAY_EXPRESS ]   MIR548AI [ SEEK ]   MIR548AI [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548AI [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616347
GTEX Portal (Tissue expression)MIR548AI
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548AI
DMDM Disease mutations100616347
Blocks (Seattle)MIR548AI
Human Protein AtlasENSG00000265226
Protein Interaction databases
FunCoupENSG00000265226
BioGRIDMIR548AI
STRING (EMBL)MIR548AI
ZODIACMIR548AI
Ontologies - Pathways
Huge Navigator MIR548AI [HugePedia]
snp3D : Map Gene to Disease100616347
BioCentury BCIQMIR548AI
ClinGenMIR548AI
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616347
Clinical trialMIR548AI
Miscellaneous
canSAR (ICR)MIR548AI (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548AI
EVEXMIR548AI
GoPubMedMIR548AI
iHOPMIR548AI
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:12 CEST 2017

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