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MIR548AO (microRNA 548ao)

Identity

Alias_symbol (synonym)hsa-mir-548ao
Other alias-
HGNC (Hugo) MIR548AO
LocusID (NCBI) 100847068
Atlas_Id 69808
Location 8p11.21  [Link to chromosome band 8p11]
Location_base_pair Starts at 41271048 and ends at 41271143 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548AO   43539
Cards
Entrez_Gene (NCBI)MIR548AO  100847068  microRNA 548ao
Aliases
GeneCards (Weizmann)MIR548AO
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:41271048-41271143 [Contig_View]  MIR548AO [Vega]
TCGA cBioPortalMIR548AO
AceView (NCBI)MIR548AO
Genatlas (Paris)MIR548AO
WikiGenes100847068
SOURCE (Princeton)MIR548AO
Genetics Home Reference (NIH)MIR548AO
miRBaseMIR548AO
dbDEMCMIR548AO
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548AO  -     chr8:41271048-41271143 -  8p11.21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548AO  -     8p11.21   [Description]    (hg19-Feb_2009)
EnsemblMIR548AO - 8p11.21 [CytoView hg19]  MIR548AO - 8p11.21 [CytoView hg38]
Mapping of homologs : NCBIMIR548AO [Mapview hg19]  MIR548AO [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548AO
Gene ExpressionMIR548AO [ NCBI-GEO ]   MIR548AO [ EBI - ARRAY_EXPRESS ]   MIR548AO [ SEEK ]   MIR548AO [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548AO [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847068
GTEX Portal (Tissue expression)MIR548AO
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548AO
DMDM Disease mutations100847068
Blocks (Seattle)MIR548AO
Protein Interaction databases
BioGRIDMIR548AO
STRING (EMBL)MIR548AO
ZODIACMIR548AO
Ontologies - Pathways
Huge Navigator MIR548AO [HugePedia]
snp3D : Map Gene to Disease100847068
BioCentury BCIQMIR548AO
ClinGenMIR548AO
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847068
Clinical trialMIR548AO
Miscellaneous
canSAR (ICR)MIR548AO (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548AO
EVEXMIR548AO
GoPubMedMIR548AO
iHOPMIR548AO
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:15:40 CET 2017

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