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MIR548AP (microRNA 548ap)

Identity

Alias_symbol (synonym)hsa-mir-548ap
Other alias-
HGNC (Hugo) MIR548AP
LocusID (NCBI) 100847084
Atlas_Id 69809
Location 15q25.3  [Link to chromosome band 15q25]
Location_base_pair Starts at 85825635 and ends at 85825730 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548AP   43465
Cards
Entrez_Gene (NCBI)MIR548AP  100847084  microRNA 548ap
Aliases
GeneCards (Weizmann)MIR548AP
Ensembl hg19 (Hinxton)ENSG00000264406 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000264406 [Gene_View]  chr15:85825635-85825730 [Contig_View]  MIR548AP [Vega]
ICGC DataPortalENSG00000264406
TCGA cBioPortalMIR548AP
AceView (NCBI)MIR548AP
Genatlas (Paris)MIR548AP
WikiGenes100847084
SOURCE (Princeton)MIR548AP
Genetics Home Reference (NIH)MIR548AP
miRBaseMIR548AP
dbDEMCMIR548AP
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548AP  -     chr15:85825635-85825730 +  15q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548AP  -     15q25.3   [Description]    (hg19-Feb_2009)
EnsemblMIR548AP - 15q25.3 [CytoView hg19]  MIR548AP - 15q25.3 [CytoView hg38]
Mapping of homologs : NCBIMIR548AP [Mapview hg19]  MIR548AP [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548AP
Alternative Splicing GalleryENSG00000264406
Gene ExpressionMIR548AP [ NCBI-GEO ]   MIR548AP [ EBI - ARRAY_EXPRESS ]   MIR548AP [ SEEK ]   MIR548AP [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548AP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847084
GTEX Portal (Tissue expression)MIR548AP
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548AP
DMDM Disease mutations100847084
Blocks (Seattle)MIR548AP
Human Protein AtlasENSG00000264406
Protein Interaction databases
FunCoupENSG00000264406
BioGRIDMIR548AP
STRING (EMBL)MIR548AP
ZODIACMIR548AP
Ontologies - Pathways
Huge Navigator MIR548AP [HugePedia]
snp3D : Map Gene to Disease100847084
BioCentury BCIQMIR548AP
ClinGenMIR548AP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847084
Clinical trialMIR548AP
Miscellaneous
canSAR (ICR)MIR548AP (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548AP
EVEXMIR548AP
GoPubMedMIR548AP
iHOPMIR548AP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:14 CEST 2017

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