Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR548AQ (microRNA 548aq)

Identity

Alias_symbol (synonym)hsa-mir-548aq
Other alias-
HGNC (Hugo) MIR548AQ
LocusID (NCBI) 100847078
Atlas_Id 69810
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 121596529 and ends at 121596600 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548AQ   43488
Cards
Entrez_Gene (NCBI)MIR548AQ  100847078  microRNA 548aq
Aliases
GeneCards (Weizmann)MIR548AQ
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr12:121596529-121596600 [Contig_View]  MIR548AQ [Vega]
TCGA cBioPortalMIR548AQ
AceView (NCBI)MIR548AQ
Genatlas (Paris)MIR548AQ
WikiGenes100847078
SOURCE (Princeton)MIR548AQ
Genetics Home Reference (NIH)MIR548AQ
miRBaseMIR548AQ
dbDEMCMIR548AQ
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548AQ  -     chr12:121596529-121596600 +  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548AQ  -     12q24.31   [Description]    (hg19-Feb_2009)
EnsemblMIR548AQ - 12q24.31 [CytoView hg19]  MIR548AQ - 12q24.31 [CytoView hg38]
Mapping of homologs : NCBIMIR548AQ [Mapview hg19]  MIR548AQ [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548AQ
Gene ExpressionMIR548AQ [ NCBI-GEO ]   MIR548AQ [ EBI - ARRAY_EXPRESS ]   MIR548AQ [ SEEK ]   MIR548AQ [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548AQ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847078
GTEX Portal (Tissue expression)MIR548AQ
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548AQ
DMDM Disease mutations100847078
Blocks (Seattle)MIR548AQ
Protein Interaction databases
BioGRIDMIR548AQ
STRING (EMBL)MIR548AQ
ZODIACMIR548AQ
Ontologies - Pathways
Huge Navigator MIR548AQ [HugePedia]
snp3D : Map Gene to Disease100847078
BioCentury BCIQMIR548AQ
ClinGenMIR548AQ
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847078
Clinical trialMIR548AQ
Miscellaneous
canSAR (ICR)MIR548AQ (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548AQ
EVEXMIR548AQ
GoPubMedMIR548AQ
iHOPMIR548AQ
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:14 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.