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MIR548AX (microRNA 548ax)

Identity

Alias_symbol (synonym)hsa-mir-548ax
Other alias-
HGNC (Hugo) MIR548AX
LocusID (NCBI) 100847063
Atlas_Id 69815
Location Xp22.2  [Link to chromosome band Xp22]
Location_base_pair Starts at 11318614 and ends at 11318686 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548AX   43528
Cards
Entrez_Gene (NCBI)MIR548AX  100847063  microRNA 548ax
Aliases
GeneCards (Weizmann)MIR548AX
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:11318614-11318686 [Contig_View]  MIR548AX [Vega]
TCGA cBioPortalMIR548AX
AceView (NCBI)MIR548AX
Genatlas (Paris)MIR548AX
WikiGenes100847063
SOURCE (Princeton)MIR548AX
Genetics Home Reference (NIH)MIR548AX
miRBaseMIR548AX
dbDEMCMIR548AX
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548AX  -     chrX:11318614-11318686 -  Xp22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548AX  -     Xp22.2   [Description]    (hg19-Feb_2009)
EnsemblMIR548AX - Xp22.2 [CytoView hg19]  MIR548AX - Xp22.2 [CytoView hg38]
Mapping of homologs : NCBIMIR548AX [Mapview hg19]  MIR548AX [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548AX
Gene ExpressionMIR548AX [ NCBI-GEO ]   MIR548AX [ EBI - ARRAY_EXPRESS ]   MIR548AX [ SEEK ]   MIR548AX [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548AX [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100847063
GTEX Portal (Tissue expression)MIR548AX
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548AX
DMDM Disease mutations100847063
Blocks (Seattle)MIR548AX
Protein Interaction databases
BioGRIDMIR548AX
STRING (EMBL)MIR548AX
ZODIACMIR548AX
Ontologies - Pathways
Huge Navigator MIR548AX [HugePedia]
snp3D : Map Gene to Disease100847063
BioCentury BCIQMIR548AX
ClinGenMIR548AX
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100847063
Clinical trialMIR548AX
Miscellaneous
canSAR (ICR)MIR548AX (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548AX
EVEXMIR548AX
GoPubMedMIR548AX
iHOPMIR548AX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:00:07 CET 2017

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