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MIR548C (microRNA 548c)

Identity

Alias_namesMIRN548C
Alias_symbol (synonym)hsa-mir-548c
Other alias
HGNC (Hugo) MIR548C
LocusID (NCBI) 693129
Atlas_Id 55856
Location 12q14.2  [Link to chromosome band 12q14]
Location_base_pair Starts at 64622509 and ends at 64622605 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548C   32800
Cards
Entrez_Gene (NCBI)MIR548C  693129  microRNA 548c
AliasesMIRN548C
GeneCards (Weizmann)MIR548C
Ensembl hg19 (Hinxton)ENSG00000207546 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000207546 [Gene_View]  chr12:64622509-64622605 [Contig_View]  MIR548C [Vega]
ICGC DataPortalENSG00000207546
TCGA cBioPortalMIR548C
AceView (NCBI)MIR548C
Genatlas (Paris)MIR548C
WikiGenes693129
SOURCE (Princeton)MIR548C
Genetics Home Reference (NIH)MIR548C
miRBaseMIR548C
dbDEMCMIR548C
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548C  -     chr12:64622509-64622605 +  12q14.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548C  -     12q14.2   [Description]    (hg19-Feb_2009)
EnsemblMIR548C - 12q14.2 [CytoView hg19]  MIR548C - 12q14.2 [CytoView hg38]
Mapping of homologs : NCBIMIR548C [Mapview hg19]  MIR548C [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548C
Alternative Splicing GalleryENSG00000207546
Gene ExpressionMIR548C [ NCBI-GEO ]   MIR548C [ EBI - ARRAY_EXPRESS ]   MIR548C [ SEEK ]   MIR548C [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548C [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693129
GTEX Portal (Tissue expression)MIR548C
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548C
DMDM Disease mutations693129
Blocks (Seattle)MIR548C
Human Protein AtlasENSG00000207546
Protein Interaction databases
FunCoupENSG00000207546
BioGRIDMIR548C
STRING (EMBL)MIR548C
ZODIACMIR548C
Ontologies - Pathways
Huge Navigator MIR548C [HugePedia]
snp3D : Map Gene to Disease693129
BioCentury BCIQMIR548C
ClinGenMIR548C
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693129
Chemical/Pharm GKB GenePA164722821
Clinical trialMIR548C
Miscellaneous
canSAR (ICR)MIR548C (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548C
EVEXMIR548C
GoPubMedMIR548C
iHOPMIR548C
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri May 19 12:26:19 CEST 2017

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