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MIR548D1 (microRNA 548d-1)

Identity

Alias_namesMIRN548D1
Alias_symbol (synonym)hsa-mir-548d-1
Other alias
HGNC (Hugo) MIR548D1
LocusID (NCBI) 693130
Atlas_Id 55160
Location 1p21.2  [Link to chromosome band 1p21]
Location_base_pair Starts at 100154611 and ends at 100178513 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548D1   32801
Cards
Entrez_Gene (NCBI)MIR548D1  693130  microRNA 548d-1
AliasesMIRN548D1
GeneCards (Weizmann)MIR548D1
Ensembl hg19 (Hinxton) [Gene_View]  chr1:100154611-100178513 [Contig_View]  MIR548D1 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:100154611-100178513 [Contig_View]  MIR548D1 [Vega]
TCGA cBioPortalMIR548D1
AceView (NCBI)MIR548D1
Genatlas (Paris)MIR548D1
WikiGenes693130
SOURCE (Princeton)MIR548D1
Genetics Home Reference (NIH)MIR548D1
miRBaseMIR548D1
dbDEMCMIR548D1
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548D1  -     chr1:100154611-100178513 -  1p21.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548D1  -     1p21.2   [Description]    (hg38-Dec_2013)
EnsemblMIR548D1 - 1p21.2 [CytoView hg19]  MIR548D1 - 1p21.2 [CytoView hg38]
Mapping of homologs : NCBIMIR548D1 [Mapview hg19]  MIR548D1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_008046 NW_004929340
Consensus coding sequences : CCDS (NCBI)MIR548D1
Gene ExpressionMIR548D1 [ NCBI-GEO ]   MIR548D1 [ EBI - ARRAY_EXPRESS ]   MIR548D1 [ SEEK ]   MIR548D1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548D1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693130
GTEX Portal (Tissue expression)MIR548D1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548D1
DMDM Disease mutations693130
Blocks (Seattle)MIR548D1
Protein Interaction databases
BioGRIDMIR548D1
STRING (EMBL)MIR548D1
ZODIACMIR548D1
Ontologies - Pathways
Huge Navigator MIR548D1 [HugePedia]
snp3D : Map Gene to Disease693130
BioCentury BCIQMIR548D1
ClinGenMIR548D1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693130
Chemical/Pharm GKB GenePA164722822
Clinical trialMIR548D1
Miscellaneous
canSAR (ICR)MIR548D1 (select the gene name)
Probes
Litterature
PubMed6 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548D1
EVEXMIR548D1
GoPubMedMIR548D1
iHOPMIR548D1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Thu Mar 30 15:10:21 CEST 2017

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