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MIR548D2 (microRNA 548d-2)

Identity

Alias_namesMIRN548D2
Alias_symbol (synonym)hsa-mir-548d-2
Other alias
HGNC (Hugo) MIR548D2
LocusID (NCBI) 693131
Atlas_Id 55154
Location 16p12.2  [Link to chromosome band 16p12]
Location_base_pair Starts at 22729603 and ends at 22803362 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548D2   32802
Cards
Entrez_Gene (NCBI)MIR548D2  693131  microRNA 548d-2
AliasesMIRN548D2
GeneCards (Weizmann)MIR548D2
Ensembl hg19 (Hinxton) [Gene_View]  chr16:22729603-22803362 [Contig_View]  MIR548D2 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:22729603-22803362 [Contig_View]  MIR548D2 [Vega]
TCGA cBioPortalMIR548D2
AceView (NCBI)MIR548D2
Genatlas (Paris)MIR548D2
WikiGenes693131
SOURCE (Princeton)MIR548D2
Genetics Home Reference (NIH)MIR548D2
miRBaseMIR548D2
dbDEMCMIR548D2
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548D2  -     chr16:22729603-22803362 +  16p12.2   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548D2  -     16p12.2   [Description]    (hg38-Dec_2013)
EnsemblMIR548D2 - 16p12.2 [CytoView hg19]  MIR548D2 - 16p12.2 [CytoView hg38]
Mapping of homologs : NCBIMIR548D2 [Mapview hg19]  MIR548D2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000017 NC_018928 NT_010783 NW_004929407
Consensus coding sequences : CCDS (NCBI)MIR548D2
Gene ExpressionMIR548D2 [ NCBI-GEO ]   MIR548D2 [ EBI - ARRAY_EXPRESS ]   MIR548D2 [ SEEK ]   MIR548D2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548D2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693131
GTEX Portal (Tissue expression)MIR548D2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548D2
DMDM Disease mutations693131
Blocks (Seattle)MIR548D2
Protein Interaction databases
BioGRIDMIR548D2
STRING (EMBL)MIR548D2
ZODIACMIR548D2
Ontologies - Pathways
Huge Navigator MIR548D2 [HugePedia]
snp3D : Map Gene to Disease693131
BioCentury BCIQMIR548D2
ClinGenMIR548D2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693131
Chemical/Pharm GKB GenePA164722823
Clinical trialMIR548D2
Miscellaneous
canSAR (ICR)MIR548D2 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548D2
EVEXMIR548D2
GoPubMedMIR548D2
iHOPMIR548D2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 13:16:34 CET 2017

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