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MIR548E (microRNA 548e)

Identity

Alias_namesMIRN548E
Alias_symbol (synonym)hsa-mir-548e
Other alias
HGNC (Hugo) MIR548E
LocusID (NCBI) 100313921
Atlas_Id 79143
Location 10q25.2  [Link to chromosome band 10q25]
Location_base_pair Starts at 110988926 and ends at 110989013 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548E   35275
Cards
Entrez_Gene (NCBI)MIR548E  100313921  microRNA 548e
AliasesMIRN548E; hsa-mir-548e
GeneCards (Weizmann)MIR548E
Ensembl hg19 (Hinxton)ENSG00000221214 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221214 [Gene_View]  chr10:110988926-110989013 [Contig_View]  MIR548E [Vega]
ICGC DataPortalENSG00000221214
TCGA cBioPortalMIR548E
AceView (NCBI)MIR548E
Genatlas (Paris)MIR548E
WikiGenes100313921
SOURCE (Princeton)MIR548E
Genetics Home Reference (NIH)MIR548E
miRBaseMIR548E
dbDEMCMIR548E
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548E  -     chr10:110988926-110989013 +  10q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548E  -     10q25.2   [Description]    (hg19-Feb_2009)
EnsemblMIR548E - 10q25.2 [CytoView hg19]  MIR548E - 10q25.2 [CytoView hg38]
Mapping of homologs : NCBIMIR548E [Mapview hg19]  MIR548E [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548E
Alternative Splicing GalleryENSG00000221214
Gene ExpressionMIR548E [ NCBI-GEO ]   MIR548E [ EBI - ARRAY_EXPRESS ]   MIR548E [ SEEK ]   MIR548E [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548E [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100313921
GTEX Portal (Tissue expression)MIR548E
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548E
DMDM Disease mutations100313921
Blocks (Seattle)MIR548E
Human Protein AtlasENSG00000221214
Protein Interaction databases
FunCoupENSG00000221214
BioGRIDMIR548E
STRING (EMBL)MIR548E
ZODIACMIR548E
Ontologies - Pathways
Huge Navigator MIR548E [HugePedia]
snp3D : Map Gene to Disease100313921
BioCentury BCIQMIR548E
ClinGenMIR548E
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100313921
Chemical/Pharm GKB GenePA164722824
Clinical trialMIR548E
Miscellaneous
canSAR (ICR)MIR548E (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548E
EVEXMIR548E
GoPubMedMIR548E
iHOPMIR548E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:29:38 CEST 2017

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