Atlas of Genetics and Cytogenetics in Oncology and Haematology

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MIR548E (microRNA 548e)


Alias (NCBI)MIRN548E
HGNC (Hugo) MIR548E
HGNC Alias symbhsa-mir-548e
HGNC Previous nameMIRN548E
LocusID (NCBI) 100313921
Atlas_Id 79143
Location 10q25.2  [Link to chromosome band 10q25]
Location_base_pair Starts at 110988926 and ends at 110989013 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)MIR548E   35275
Entrez_Gene (NCBI)MIR548E    microRNA 548e
AliasesMIRN548E; hsa-mir-548e
GeneCards (Weizmann)MIR548E
Ensembl hg19 (Hinxton)ENSG00000221214 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221214 [Gene_View]  ENSG00000221214 [Sequence]  chr10:110988926-110989013 [Contig_View]  MIR548E [Vega]
ICGC DataPortalENSG00000221214
TCGA cBioPortalMIR548E
AceView (NCBI)MIR548E
Genatlas (Paris)MIR548E
SOURCE (Princeton)MIR548E
Genetics Home Reference (NIH)MIR548E
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548E  -     chr10:110988926-110989013 +  10q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548E  -     10q25.2   [Description]    (hg19-Feb_2009)
GoldenPathMIR548E - 10q25.2 [CytoView hg19]  MIR548E - 10q25.2 [CytoView hg38]
Genome Data Viewer NCBIMIR548E [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548E
Gene ExpressionMIR548E [ NCBI-GEO ]   MIR548E [ EBI - ARRAY_EXPRESS ]   MIR548E [ SEEK ]   MIR548E [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548E [ Firebrowse - Broad ]
GenevisibleExpression of MIR548E in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100313921
GTEX Portal (Tissue expression)MIR548E
Human Protein AtlasENSG00000221214-MIR548E [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548E
Human Protein Atlas [tissue]ENSG00000221214-MIR548E [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:09:49 CEST 2021

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