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MIR548E (microRNA 548e)

Identity

Alias (NCBI)MIRN548E
hsa-mir-548e
HGNC (Hugo) MIR548E
HGNC Alias symbhsa-mir-548e
HGNC Previous nameMIRN548E
LocusID (NCBI) 100313921
Atlas_Id 79143
Location 10q25.2  [Link to chromosome band 10q25]
Location_base_pair Starts at 110988926 and ends at 110989013 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR548E   35275
Cards
Entrez_Gene (NCBI)MIR548E    microRNA 548e
AliasesMIRN548E; hsa-mir-548e
GeneCards (Weizmann)MIR548E
Ensembl hg19 (Hinxton)ENSG00000221214 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221214 [Gene_View]  ENSG00000221214 [Sequence]  chr10:110988926-110989013 [Contig_View]  MIR548E [Vega]
ICGC DataPortalENSG00000221214
TCGA cBioPortalMIR548E
AceView (NCBI)MIR548E
Genatlas (Paris)MIR548E
SOURCE (Princeton)MIR548E
Genetics Home Reference (NIH)MIR548E
miRBaseMIR548E
dbDEMCMIR548E
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548E  -     chr10:110988926-110989013 +  10q25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548E  -     10q25.2   [Description]    (hg19-Feb_2009)
GoldenPathMIR548E - 10q25.2 [CytoView hg19]  MIR548E - 10q25.2 [CytoView hg38]
ImmunoBaseENSG00000221214
Genome Data Viewer NCBIMIR548E [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548E
Gene ExpressionMIR548E [ NCBI-GEO ]   MIR548E [ EBI - ARRAY_EXPRESS ]   MIR548E [ SEEK ]   MIR548E [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548E [ Firebrowse - Broad ]
GenevisibleExpression of MIR548E in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100313921
GTEX Portal (Tissue expression)MIR548E
Human Protein AtlasENSG00000221214-MIR548E [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548E
Human Protein Atlas [tissue]ENSG00000221214-MIR548E [tissue]
Protein Interaction databases
BioGRIDMIR548E
STRING (EMBL)MIR548E
ZODIACMIR548E
Ontologies - Pathways
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMIR548E
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:09:49 CEST 2021

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