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MIR548F3 (microRNA 548f-3)

Identity

Alias_namesMIRN548F3
Alias_symbol (synonym)hsa-mir-548f-3
Other aliasMIR548F-3
HGNC (Hugo) MIR548F3
LocusID (NCBI) 100302159
Atlas_Id 69824
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 218610975 and ends at 219281452 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548F3   35307
Cards
Entrez_Gene (NCBI)MIR548F3  100302159  microRNA 548f-3
AliasesMIR548F-3; MIRN548F3; hsa-mir-548f-3
GeneCards (Weizmann)MIR548F3
Ensembl hg19 (Hinxton) [Gene_View]  chr1:218610975-219281452 [Contig_View]  MIR548F3 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:218610975-219281452 [Contig_View]  MIR548F3 [Vega]
TCGA cBioPortalMIR548F3
AceView (NCBI)MIR548F3
Genatlas (Paris)MIR548F3
WikiGenes100302159
SOURCE (Princeton)MIR548F3
Genetics Home Reference (NIH)MIR548F3
miRBaseMIR548F3
dbDEMCMIR548F3
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548F3  -     chr1:218610975-219281452 +  1q41   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548F3  -     1q41   [Description]    (hg38-Dec_2013)
EnsemblMIR548F3 - 1q41 [CytoView hg19]  MIR548F3 - 1q41 [CytoView hg38]
Mapping of homologs : NCBIMIR548F3 [Mapview hg19]  MIR548F3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_034772 NW_004929323
Consensus coding sequences : CCDS (NCBI)MIR548F3
Gene ExpressionMIR548F3 [ NCBI-GEO ]   MIR548F3 [ EBI - ARRAY_EXPRESS ]   MIR548F3 [ SEEK ]   MIR548F3 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548F3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302159
GTEX Portal (Tissue expression)MIR548F3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548F3
DMDM Disease mutations100302159
Blocks (Seattle)MIR548F3
Protein Interaction databases
BioGRIDMIR548F3
STRING (EMBL)MIR548F3
ZODIACMIR548F3
Ontologies - Pathways
Huge Navigator MIR548F3 [HugePedia]
snp3D : Map Gene to Disease100302159
BioCentury BCIQMIR548F3
ClinGenMIR548F3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302159
Clinical trialMIR548F3
Miscellaneous
canSAR (ICR)MIR548F3 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548F3
EVEXMIR548F3
GoPubMedMIR548F3
iHOPMIR548F3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:31:28 CET 2017

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