Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR548G (microRNA 548g)

Identity

Alias_namesMIRN548G
Alias_symbol (synonym)hsa-mir-548g
Other alias
HGNC (Hugo) MIR548G
LocusID (NCBI) 100313938
Atlas_Id 69827
Location 3q12.1  [Link to chromosome band 3q12]
Location_base_pair Starts at 99273153 and ends at 99717059 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
MIR548G (3q12.1) / F2R (5q13.3)MIR548G (3q12.1) / MIR548G (3q12.1)MIR548G (3q12.1) / TNS1 (2q35)
TSEN2 (3p25.2) / MIR548G (3q12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548G   35326
Cards
Entrez_Gene (NCBI)MIR548G  100313938  microRNA 548g
AliasesMIRN548G; hsa-mir-548g
GeneCards (Weizmann)MIR548G
Ensembl hg19 (Hinxton)ENSG00000221369 [Gene_View]  chr3:99273153-99717059 [Contig_View]  MIR548G [Vega]
Ensembl hg38 (Hinxton)ENSG00000221369 [Gene_View]  chr3:99273153-99717059 [Contig_View]  MIR548G [Vega]
ICGC DataPortalENSG00000221369
TCGA cBioPortalMIR548G
AceView (NCBI)MIR548G
Genatlas (Paris)MIR548G
WikiGenes100313938
SOURCE (Princeton)MIR548G
Genetics Home Reference (NIH)MIR548G
miRBaseMIR548G
dbDEMCMIR548G
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548G  -     chr3:99273153-99717059 -  3q12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548G  -     3q12.1   [Description]    (hg38-Dec_2013)
EnsemblMIR548G - 3q12.1 [CytoView hg19]  MIR548G - 3q12.1 [CytoView hg38]
Mapping of homologs : NCBIMIR548G [Mapview hg19]  MIR548G [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)MIR548G
Alternative Splicing GalleryENSG00000221369
Gene ExpressionMIR548G [ NCBI-GEO ]   MIR548G [ EBI - ARRAY_EXPRESS ]   MIR548G [ SEEK ]   MIR548G [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548G [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100313938
GTEX Portal (Tissue expression)MIR548G
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548G
DMDM Disease mutations100313938
Blocks (Seattle)MIR548G
Human Protein AtlasENSG00000221369
Protein Interaction databases
FunCoupENSG00000221369
BioGRIDMIR548G
STRING (EMBL)MIR548G
ZODIACMIR548G
Ontologies - Pathways
Huge Navigator MIR548G [HugePedia]
snp3D : Map Gene to Disease100313938
BioCentury BCIQMIR548G
ClinGenMIR548G
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100313938
Clinical trialMIR548G
Miscellaneous
canSAR (ICR)MIR548G (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548G
EVEXMIR548G
GoPubMedMIR548G
iHOPMIR548G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:31:29 CET 2017

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