Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR548G (microRNA 548g)

Identity

Alias (NCBI)MIRN548G
hsa-mir-548g
HGNC (Hugo) MIR548G
HGNC Alias symbhsa-mir-548g
HGNC Previous nameMIRN548G
LocusID (NCBI) 100313938
Atlas_Id 69827
Location 4q31.22  [Link to chromosome band 4q31]
Location_base_pair Starts at 147344629 and ends at 147344717 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MIR548G (3q12.1) / F2R (5q13.3)MIR548G (3q12.1) / MIR548G (3q12.1)MIR548G (3q12.1) / TNS1 (2q35)
TSEN2 (3p25.2) / MIR548G (3q12.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548G   35326
Cards
Entrez_Gene (NCBI)MIR548G  100313938  microRNA 548g
AliasesMIRN548G; hsa-mir-548g
GeneCards (Weizmann)MIR548G
Ensembl hg19 (Hinxton)ENSG00000221369 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221369 [Gene_View]  ENSG00000221369 [Sequence]  chr4:147344629-147344717 [Contig_View]  MIR548G [Vega]
ICGC DataPortalENSG00000221369
TCGA cBioPortalMIR548G
AceView (NCBI)MIR548G
Genatlas (Paris)MIR548G
WikiGenes100313938
SOURCE (Princeton)MIR548G
Genetics Home Reference (NIH)MIR548G
miRBaseMIR548G
dbDEMCMIR548G
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548G  -     chr4:147344629-147344717 -  4q31.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548G  -     4q31.22   [Description]    (hg19-Feb_2009)
GoldenPathMIR548G - 4q31.22 [CytoView hg19]  MIR548G - 4q31.22 [CytoView hg38]
ImmunoBaseENSG00000221369
genome Data Viewer NCBIMIR548G [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548G
Alternative Splicing GalleryENSG00000221369
Gene ExpressionMIR548G [ NCBI-GEO ]   MIR548G [ EBI - ARRAY_EXPRESS ]   MIR548G [ SEEK ]   MIR548G [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548G [ Firebrowse - Broad ]
GenevisibleExpression of MIR548G in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100313938
GTEX Portal (Tissue expression)MIR548G
Human Protein AtlasENSG00000221369-MIR548G [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548G
DMDM Disease mutations100313938
Blocks (Seattle)MIR548G
Human Protein Atlas [tissue]ENSG00000221369-MIR548G [tissue]
Protein Interaction databases
FunCoupENSG00000221369
BioGRIDMIR548G
STRING (EMBL)MIR548G
ZODIACMIR548G
Ontologies - Pathways
Huge Navigator MIR548G [HugePedia]
snp3D : Map Gene to Disease100313938
BioCentury BCIQMIR548G
ClinGenMIR548G
Clinical trials, drugs, therapy
Protein Interactions : CTD100313938
Pharm GKB GenePA164722830
Clinical trialMIR548G
Miscellaneous
canSAR (ICR)MIR548G (select the gene name)
HarmonizomeMIR548G
DataMed IndexMIR548G
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548G
EVEXMIR548G
GoPubMedMIR548G
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:26:40 CEST 2020

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