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MIR548H2 (microRNA 548h-2)

Identity

Alias (NCBI)MIR548H-2
MIRN548H2
HGNC (Hugo) MIR548H2
HGNC Alias symbhsa-mir-548h-2
HGNC Previous nameMIRN548H2
LocusID (NCBI) 100313773
Atlas_Id 69828
Location 16p13.13  [Link to chromosome band 16p13]
Location_base_pair Starts at 11306440 and ends at 11306527 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
MIR548H2 (3q25.1) / DPM2 (9q34.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR548H2   35343
Cards
Entrez_Gene (NCBI)MIR548H2    microRNA 548h-2
AliasesMIR548H-2; MIRN548H2
GeneCards (Weizmann)MIR548H2
Ensembl hg19 (Hinxton)ENSG00000221801 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221801 [Gene_View]  ENSG00000221801 [Sequence]  chr16:11306440-11306527 [Contig_View]  MIR548H2 [Vega]
ICGC DataPortalENSG00000221801
TCGA cBioPortalMIR548H2
AceView (NCBI)MIR548H2
Genatlas (Paris)MIR548H2
SOURCE (Princeton)MIR548H2
Genetics Home Reference (NIH)MIR548H2
miRBaseMIR548H2
dbDEMCMIR548H2
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548H2  -     chr16:11306440-11306527 -  16p13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548H2  -     16p13.13   [Description]    (hg19-Feb_2009)
GoldenPathMIR548H2 - 16p13.13 [CytoView hg19]  MIR548H2 - 16p13.13 [CytoView hg38]
ImmunoBaseENSG00000221801
genome Data Viewer NCBIMIR548H2 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548H2
Alternative Splicing GalleryENSG00000221801
Gene ExpressionMIR548H2 [ NCBI-GEO ]   MIR548H2 [ EBI - ARRAY_EXPRESS ]   MIR548H2 [ SEEK ]   MIR548H2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548H2 [ Firebrowse - Broad ]
GenevisibleExpression of MIR548H2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100313773
GTEX Portal (Tissue expression)MIR548H2
Human Protein AtlasENSG00000221801-MIR548H2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548H2
Blocks (Seattle)MIR548H2
Human Protein Atlas [tissue]ENSG00000221801-MIR548H2 [tissue]
Protein Interaction databases
BioGRIDMIR548H2
STRING (EMBL)MIR548H2
ZODIACMIR548H2
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548H2
EVEXMIR548H2
GoPubMedMIR548H2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 17:16:00 CET 2020

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