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MIR548H2 (microRNA 548h-2)

Identity

Alias_namesMIRN548H2
Alias_symbol (synonym)hsa-mir-548h-2
Other aliasMIR548H-2
HGNC (Hugo) MIR548H2
LocusID (NCBI) 100313773
Atlas_Id 69828
Location 16p13.13  [Link to chromosome band 16p13]
Location_base_pair Starts at 11306440 and ends at 11306527 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MIR548H2 (3q25.1) / DPM2 (9q34.11)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548H2   35343
Cards
Entrez_Gene (NCBI)MIR548H2  100313773  microRNA 548h-2
AliasesMIR548H-2; MIRN548H2
GeneCards (Weizmann)MIR548H2
Ensembl hg19 (Hinxton)ENSG00000221801 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221801 [Gene_View]  chr16:11306440-11306527 [Contig_View]  MIR548H2 [Vega]
ICGC DataPortalENSG00000221801
TCGA cBioPortalMIR548H2
AceView (NCBI)MIR548H2
Genatlas (Paris)MIR548H2
WikiGenes100313773
SOURCE (Princeton)MIR548H2
Genetics Home Reference (NIH)MIR548H2
miRBaseMIR548H2
dbDEMCMIR548H2
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548H2  -     chr16:11306440-11306527 -  16p13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548H2  -     16p13.13   [Description]    (hg19-Feb_2009)
EnsemblMIR548H2 - 16p13.13 [CytoView hg19]  MIR548H2 - 16p13.13 [CytoView hg38]
Mapping of homologs : NCBIMIR548H2 [Mapview hg19]  MIR548H2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548H2
Alternative Splicing GalleryENSG00000221801
Gene ExpressionMIR548H2 [ NCBI-GEO ]   MIR548H2 [ EBI - ARRAY_EXPRESS ]   MIR548H2 [ SEEK ]   MIR548H2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548H2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100313773
GTEX Portal (Tissue expression)MIR548H2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548H2
DMDM Disease mutations100313773
Blocks (Seattle)MIR548H2
Human Protein AtlasENSG00000221801
Protein Interaction databases
FunCoupENSG00000221801
BioGRIDMIR548H2
STRING (EMBL)MIR548H2
ZODIACMIR548H2
Ontologies - Pathways
Huge Navigator MIR548H2 [HugePedia]
snp3D : Map Gene to Disease100313773
BioCentury BCIQMIR548H2
ClinGenMIR548H2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100313773
Chemical/Pharm GKB GenePA164722832
Clinical trialMIR548H2
Miscellaneous
canSAR (ICR)MIR548H2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548H2
EVEXMIR548H2
GoPubMedMIR548H2
iHOPMIR548H2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:29:39 CEST 2017

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