Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

MIR548H4 (microRNA 548h-4)

Identity

Alias_namesMIRN548H4
Alias_symbol (synonym)hsa-mir-548h-4
Other aliasMIR548H-4
HGNC (Hugo) MIR548H4
LocusID (NCBI) 100313884
Atlas_Id 69830
Location 8p21.2  [Link to chromosome band 8p21]
Location_base_pair Starts at 27048853 and ends at 27048963 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548H4   35345
Cards
Entrez_Gene (NCBI)MIR548H4  100313884  microRNA 548h-4
AliasesMIR548H-4; MIRN548H4; hsa-mir-548h-4
GeneCards (Weizmann)MIR548H4
Ensembl hg19 (Hinxton)ENSG00000221616 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221616 [Gene_View]  chr8:27048853-27048963 [Contig_View]  MIR548H4 [Vega]
ICGC DataPortalENSG00000221616
TCGA cBioPortalMIR548H4
AceView (NCBI)MIR548H4
Genatlas (Paris)MIR548H4
WikiGenes100313884
SOURCE (Princeton)MIR548H4
Genetics Home Reference (NIH)MIR548H4
miRBaseMIR548H4
dbDEMCMIR548H4
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548H4  -     chr8:27048853-27048963 -  8p21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548H4  -     8p21.2   [Description]    (hg19-Feb_2009)
EnsemblMIR548H4 - 8p21.2 [CytoView hg19]  MIR548H4 - 8p21.2 [CytoView hg38]
Mapping of homologs : NCBIMIR548H4 [Mapview hg19]  MIR548H4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548H4
Alternative Splicing GalleryENSG00000221616
Gene ExpressionMIR548H4 [ NCBI-GEO ]   MIR548H4 [ EBI - ARRAY_EXPRESS ]   MIR548H4 [ SEEK ]   MIR548H4 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548H4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100313884
GTEX Portal (Tissue expression)MIR548H4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548H4
DMDM Disease mutations100313884
Blocks (Seattle)MIR548H4
Human Protein AtlasENSG00000221616
Protein Interaction databases
FunCoupENSG00000221616
BioGRIDMIR548H4
STRING (EMBL)MIR548H4
ZODIACMIR548H4
Ontologies - Pathways
Huge Navigator MIR548H4 [HugePedia]
snp3D : Map Gene to Disease100313884
BioCentury BCIQMIR548H4
ClinGenMIR548H4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100313884
Chemical/Pharm GKB GenePA164722834
Clinical trialMIR548H4
Miscellaneous
canSAR (ICR)MIR548H4 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548H4
EVEXMIR548H4
GoPubMedMIR548H4
iHOPMIR548H4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:19 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.