Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR548H4 (microRNA 548h-4)

Identity

Alias_namesMIRN548H4
Alias_symbol (synonym)hsa-mir-548h-4
Other aliasMIR548H-4
HGNC (Hugo) MIR548H4
LocusID (NCBI) 100313884
Atlas_Id 69830
Location 15q23  [Link to chromosome band 15q23]
Location_base_pair Starts at 69116303 and ends at 69489862 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548H4   35345
Cards
Entrez_Gene (NCBI)MIR548H4  100313884  microRNA 548h-4
AliasesMIR548H-4; MIRN548H4; hsa-mir-548h-4
GeneCards (Weizmann)MIR548H4
Ensembl hg19 (Hinxton)ENSG00000221616 [Gene_View]  chr15:69116303-69489862 [Contig_View]  MIR548H4 [Vega]
Ensembl hg38 (Hinxton)ENSG00000221616 [Gene_View]  chr15:69116303-69489862 [Contig_View]  MIR548H4 [Vega]
ICGC DataPortalENSG00000221616
TCGA cBioPortalMIR548H4
AceView (NCBI)MIR548H4
Genatlas (Paris)MIR548H4
WikiGenes100313884
SOURCE (Princeton)MIR548H4
Genetics Home Reference (NIH)MIR548H4
miRBaseMIR548H4
dbDEMCMIR548H4
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548H4  -     chr15:69116303-69489862 +  15q23   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548H4  -     15q23   [Description]    (hg38-Dec_2013)
EnsemblMIR548H4 - 15q23 [CytoView hg19]  MIR548H4 - 15q23 [CytoView hg38]
Mapping of homologs : NCBIMIR548H4 [Mapview hg19]  MIR548H4 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_167187 NW_004929337
Consensus coding sequences : CCDS (NCBI)MIR548H4
Alternative Splicing GalleryENSG00000221616
Gene ExpressionMIR548H4 [ NCBI-GEO ]   MIR548H4 [ EBI - ARRAY_EXPRESS ]   MIR548H4 [ SEEK ]   MIR548H4 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548H4 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100313884
GTEX Portal (Tissue expression)MIR548H4
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548H4
DMDM Disease mutations100313884
Blocks (Seattle)MIR548H4
Human Protein AtlasENSG00000221616
Protein Interaction databases
FunCoupENSG00000221616
BioGRIDMIR548H4
STRING (EMBL)MIR548H4
ZODIACMIR548H4
Ontologies - Pathways
Huge Navigator MIR548H4 [HugePedia]
snp3D : Map Gene to Disease100313884
BioCentury BCIQMIR548H4
ClinGenMIR548H4
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100313884
Clinical trialMIR548H4
Miscellaneous
canSAR (ICR)MIR548H4 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548H4
EVEXMIR548H4
GoPubMedMIR548H4
iHOPMIR548H4
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:31:30 CET 2017

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