Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR548I1 (microRNA 548i-1)

Identity

Alias_namesMIRN548I1
Alias_symbol (synonym)hsa-mir-548i-1
Other aliasMIR548I-1
mir-548i-1
HGNC (Hugo) MIR548I1
LocusID (NCBI) 100302204
Atlas_Id 69831
Location 3q21.2  [Link to chromosome band 3q21]
Location_base_pair Starts at 125790404 and ends at 125790552 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548I1   35352
Cards
Entrez_Gene (NCBI)MIR548I1  100302204  microRNA 548i-1
AliasesMIR548I-1; MIRN548I1; hsa-mir-548i-1; mir-548i-1
GeneCards (Weizmann)MIR548I1
Ensembl hg19 (Hinxton)ENSG00000221737 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221737 [Gene_View]  chr3:125790404-125790552 [Contig_View]  MIR548I1 [Vega]
ICGC DataPortalENSG00000221737
TCGA cBioPortalMIR548I1
AceView (NCBI)MIR548I1
Genatlas (Paris)MIR548I1
WikiGenes100302204
SOURCE (Princeton)MIR548I1
Genetics Home Reference (NIH)MIR548I1
miRBaseMIR548I1
dbDEMCMIR548I1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548I1  -     chr3:125790404-125790552 -  3q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548I1  -     3q21.2   [Description]    (hg19-Feb_2009)
EnsemblMIR548I1 - 3q21.2 [CytoView hg19]  MIR548I1 - 3q21.2 [CytoView hg38]
Mapping of homologs : NCBIMIR548I1 [Mapview hg19]  MIR548I1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM610169
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_187537
Consensus coding sequences : CCDS (NCBI)MIR548I1
Alternative Splicing GalleryENSG00000221737
Gene ExpressionMIR548I1 [ NCBI-GEO ]   MIR548I1 [ EBI - ARRAY_EXPRESS ]   MIR548I1 [ SEEK ]   MIR548I1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548I1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302204
GTEX Portal (Tissue expression)MIR548I1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548I1
DMDM Disease mutations100302204
Blocks (Seattle)MIR548I1
Human Protein AtlasENSG00000221737
Protein Interaction databases
FunCoupENSG00000221737
BioGRIDMIR548I1
STRING (EMBL)MIR548I1
ZODIACMIR548I1
Ontologies - Pathways
Huge Navigator MIR548I1 [HugePedia]
snp3D : Map Gene to Disease100302204
BioCentury BCIQMIR548I1
ClinGenMIR548I1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302204
Chemical/Pharm GKB GenePA164722835
Clinical trialMIR548I1
Miscellaneous
canSAR (ICR)MIR548I1 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548I1
EVEXMIR548I1
GoPubMedMIR548I1
iHOPMIR548I1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:29:19 CEST 2017

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