Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR548I3 (microRNA 548i-3)

Identity

Alias_namesMIRN548I3
Alias_symbol (synonym)hsa-mir-548i-3
Other aliasMIR548I-3
mir-548i-3
HGNC (Hugo) MIR548I3
LocusID (NCBI) 100302186
Atlas_Id 69833
Location 8p23.1  [Link to chromosome band 8p23]
Location_base_pair Starts at 7946463 and ends at 7946611 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548I3   35354
Cards
Entrez_Gene (NCBI)MIR548I3  100302186  microRNA 548i-3
AliasesMIR548I-3; MIRN548I3; hsa-mir-548i-3; mir-548i-3
GeneCards (Weizmann)MIR548I3
Ensembl hg19 (Hinxton)ENSG00000221305 [Gene_View]  chr8:7946463-7946611 [Contig_View]  MIR548I3 [Vega]
Ensembl hg38 (Hinxton)ENSG00000221305 [Gene_View]  chr8:7946463-7946611 [Contig_View]  MIR548I3 [Vega]
ICGC DataPortalENSG00000221305
TCGA cBioPortalMIR548I3
AceView (NCBI)MIR548I3
Genatlas (Paris)MIR548I3
WikiGenes100302186
SOURCE (Princeton)MIR548I3
Genetics Home Reference (NIH)MIR548I3
miRBaseMIR548I3
dbDEMCMIR548I3
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548I3  -     chr8:7946463-7946611 -  8p23.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548I3  -     8p23.1   [Description]    (hg38-Dec_2013)
EnsemblMIR548I3 - 8p23.1 [CytoView hg19]  MIR548I3 - 8p23.1 [CytoView hg38]
Mapping of homologs : NCBIMIR548I3 [Mapview hg19]  MIR548I3 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM610171
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000008 NC_018919 NT_077531 NW_004929335
Consensus coding sequences : CCDS (NCBI)MIR548I3
Alternative Splicing GalleryENSG00000221305
Gene ExpressionMIR548I3 [ NCBI-GEO ]   MIR548I3 [ EBI - ARRAY_EXPRESS ]   MIR548I3 [ SEEK ]   MIR548I3 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548I3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302186
GTEX Portal (Tissue expression)MIR548I3
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548I3
DMDM Disease mutations100302186
Blocks (Seattle)MIR548I3
Human Protein AtlasENSG00000221305
Protein Interaction databases
FunCoupENSG00000221305
BioGRIDMIR548I3
STRING (EMBL)MIR548I3
ZODIACMIR548I3
Ontologies - Pathways
Huge Navigator MIR548I3 [HugePedia]
snp3D : Map Gene to Disease100302186
BioCentury BCIQMIR548I3
ClinGenMIR548I3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302186
Clinical trialMIR548I3
Miscellaneous
canSAR (ICR)MIR548I3 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548I3
EVEXMIR548I3
GoPubMedMIR548I3
iHOPMIR548I3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:31:31 CET 2017

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