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MIR548J (microRNA 548j)

Identity

Alias_namesMIRN548J
Alias_symbol (synonym)hsa-mir-548j
Other alias
HGNC (Hugo) MIR548J
LocusID (NCBI) 100313914
Atlas_Id 69835
Location 22q12.1  [Link to chromosome band 22q12]
Location_base_pair Starts at 26555212 and ends at 26555323 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548J   35276
Cards
Entrez_Gene (NCBI)MIR548J  100313914  microRNA 548j
AliasesMIRN548J; hsa-mir-548j
GeneCards (Weizmann)MIR548J
Ensembl hg19 (Hinxton)ENSG00000221760 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221760 [Gene_View]  chr22:26555212-26555323 [Contig_View]  MIR548J [Vega]
ICGC DataPortalENSG00000221760
TCGA cBioPortalMIR548J
AceView (NCBI)MIR548J
Genatlas (Paris)MIR548J
WikiGenes100313914
SOURCE (Princeton)MIR548J
Genetics Home Reference (NIH)MIR548J
miRBaseMIR548J
dbDEMCMIR548J
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548J  -     chr22:26555212-26555323 -  22q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548J  -     22q12.1   [Description]    (hg19-Feb_2009)
EnsemblMIR548J - 22q12.1 [CytoView hg19]  MIR548J - 22q12.1 [CytoView hg38]
Mapping of homologs : NCBIMIR548J [Mapview hg19]  MIR548J [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548J
Alternative Splicing GalleryENSG00000221760
Gene ExpressionMIR548J [ NCBI-GEO ]   MIR548J [ EBI - ARRAY_EXPRESS ]   MIR548J [ SEEK ]   MIR548J [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548J [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100313914
GTEX Portal (Tissue expression)MIR548J
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548J
DMDM Disease mutations100313914
Blocks (Seattle)MIR548J
Human Protein AtlasENSG00000221760
Protein Interaction databases
FunCoupENSG00000221760
BioGRIDMIR548J
STRING (EMBL)MIR548J
ZODIACMIR548J
Ontologies - Pathways
Huge Navigator MIR548J [HugePedia]
snp3D : Map Gene to Disease100313914
BioCentury BCIQMIR548J
ClinGenMIR548J
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100313914
Chemical/Pharm GKB GenePA164722839
Clinical trialMIR548J
Miscellaneous
canSAR (ICR)MIR548J (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548J
EVEXMIR548J
GoPubMedMIR548J
iHOPMIR548J
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:20 CEST 2017

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