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MIR548L (microRNA 548l)

Identity

Alias (NCBI)MIRN548L
hsa-mir-548l
HGNC (Hugo) MIR548L
HGNC Alias symbhsa-mir-548l
HGNC Previous nameMIRN548L
LocusID (NCBI) 100302275
Atlas_Id 55205
Location 11q21  [Link to chromosome band 11q21]
Location_base_pair Starts at 94466495 and ends at 94466580 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)MIR548L   35292
Cards
Entrez_Gene (NCBI)MIR548L    microRNA 548l
AliasesMIRN548L; hsa-mir-548l
GeneCards (Weizmann)MIR548L
Ensembl hg19 (Hinxton)ENSG00000221230 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221230 [Gene_View]  ENSG00000221230 [Sequence]  chr11:94466495-94466580 [Contig_View]  MIR548L [Vega]
ICGC DataPortalENSG00000221230
TCGA cBioPortalMIR548L
AceView (NCBI)MIR548L
Genatlas (Paris)MIR548L
SOURCE (Princeton)MIR548L
Genetics Home Reference (NIH)MIR548L
miRBaseMIR548L
dbDEMCMIR548L
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548L  -     chr11:94466495-94466580 -  11q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548L  -     11q21   [Description]    (hg19-Feb_2009)
GoldenPathMIR548L - 11q21 [CytoView hg19]  MIR548L - 11q21 [CytoView hg38]
ImmunoBaseENSG00000221230
genome Data Viewer NCBIMIR548L [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548L
Alternative Splicing GalleryENSG00000221230
Gene ExpressionMIR548L [ NCBI-GEO ]   MIR548L [ EBI - ARRAY_EXPRESS ]   MIR548L [ SEEK ]   MIR548L [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548L [ Firebrowse - Broad ]
GenevisibleExpression of MIR548L in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100302275
GTEX Portal (Tissue expression)MIR548L
Human Protein AtlasENSG00000221230-MIR548L [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548L
Blocks (Seattle)MIR548L
Human Protein Atlas [tissue]ENSG00000221230-MIR548L [tissue]
Protein Interaction databases
BioGRIDMIR548L
STRING (EMBL)MIR548L
ZODIACMIR548L
Ontologies - Pathways
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMIR548L
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Fri Jan 1 18:26:29 CET 2021
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