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MIR548O (microRNA 548o)

Identity

Alias_namesMIRN548O
Alias_symbol (synonym)hsa-mir-548o
Other alias
HGNC (Hugo) MIR548O
LocusID (NCBI) 100313829
Atlas_Id 77297
Location 7q22.1  [Link to chromosome band 7q22]
Location_base_pair Starts at 102405742 and ends at 102405855 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548O   35333
Cards
Entrez_Gene (NCBI)MIR548O  100313829  microRNA 548o
AliasesMIRN548O
GeneCards (Weizmann)MIR548O
Ensembl hg19 (Hinxton)ENSG00000221510 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221510 [Gene_View]  chr7:102405742-102405855 [Contig_View]  MIR548O [Vega]
ICGC DataPortalENSG00000221510
TCGA cBioPortalMIR548O
AceView (NCBI)MIR548O
Genatlas (Paris)MIR548O
WikiGenes100313829
SOURCE (Princeton)MIR548O
Genetics Home Reference (NIH)MIR548O
miRBaseMIR548O
dbDEMCMIR548O
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548O  -     chr7:102405742-102405855 -  7q22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548O  -     7q22.1   [Description]    (hg19-Feb_2009)
EnsemblMIR548O - 7q22.1 [CytoView hg19]  MIR548O - 7q22.1 [CytoView hg38]
Mapping of homologs : NCBIMIR548O [Mapview hg19]  MIR548O [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548O
Alternative Splicing GalleryENSG00000221510
Gene ExpressionMIR548O [ NCBI-GEO ]   MIR548O [ EBI - ARRAY_EXPRESS ]   MIR548O [ SEEK ]   MIR548O [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548O [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100313829
GTEX Portal (Tissue expression)MIR548O
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548O
DMDM Disease mutations100313829
Blocks (Seattle)MIR548O
Human Protein AtlasENSG00000221510
Protein Interaction databases
FunCoupENSG00000221510
BioGRIDMIR548O
STRING (EMBL)MIR548O
ZODIACMIR548O
Ontologies - Pathways
Huge Navigator MIR548O [HugePedia]
snp3D : Map Gene to Disease100313829
BioCentury BCIQMIR548O
ClinGenMIR548O
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100313829
Chemical/Pharm GKB GenePA164722844
Clinical trialMIR548O
Miscellaneous
canSAR (ICR)MIR548O (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548O
EVEXMIR548O
GoPubMedMIR548O
iHOPMIR548O
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:21 CEST 2017

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