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MIR548P (microRNA 548p)

Identity

Alias_namesMIRN548P
Alias_symbol (synonym)hsa-mir-548p
Other alias
HGNC (Hugo) MIR548P
LocusID (NCBI) 100302288
Atlas_Id 77685
Location 5q21.1  [Link to chromosome band 5q21]
Location_base_pair Starts at 100816482 and ends at 100816565 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548P   35351
Cards
Entrez_Gene (NCBI)MIR548P  100302288  microRNA 548p
AliasesMIRN548P; hsa-mir-548p
GeneCards (Weizmann)MIR548P
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:100816482-100816565 [Contig_View]  MIR548P [Vega]
TCGA cBioPortalMIR548P
AceView (NCBI)MIR548P
Genatlas (Paris)MIR548P
WikiGenes100302288
SOURCE (Princeton)MIR548P
Genetics Home Reference (NIH)MIR548P
miRBaseMIR548P
dbDEMCMIR548P
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548P  -     chr5:100816482-100816565 -  5q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548P  -     5q21.1   [Description]    (hg19-Feb_2009)
EnsemblMIR548P - 5q21.1 [CytoView hg19]  MIR548P - 5q21.1 [CytoView hg38]
Mapping of homologs : NCBIMIR548P [Mapview hg19]  MIR548P [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548P
Gene ExpressionMIR548P [ NCBI-GEO ]   MIR548P [ EBI - ARRAY_EXPRESS ]   MIR548P [ SEEK ]   MIR548P [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548P [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100302288
GTEX Portal (Tissue expression)MIR548P
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548P
DMDM Disease mutations100302288
Blocks (Seattle)MIR548P
Protein Interaction databases
BioGRIDMIR548P
STRING (EMBL)MIR548P
ZODIACMIR548P
Ontologies - Pathways
Huge Navigator MIR548P [HugePedia]
snp3D : Map Gene to Disease100302288
BioCentury BCIQMIR548P
ClinGenMIR548P
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100302288
Chemical/Pharm GKB GenePA164722845
Clinical trialMIR548P
Miscellaneous
canSAR (ICR)MIR548P (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548P
EVEXMIR548P
GoPubMedMIR548P
iHOPMIR548P
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:12:28 CET 2017

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