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MIR548Q (microRNA 548q)

Identity

Alias (NCBI)-
HGNC (Hugo) MIR548Q
HGNC Alias symbhsa-mir-548q
LocusID (NCBI) 100313841
Atlas_Id 69839
Location 10p13  [Link to chromosome band 10p13]
Location_base_pair Starts at 12725254 and ends at 12725353 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)MIR548Q   37312
Cards
Entrez_Gene (NCBI)MIR548Q    microRNA 548q
Aliases
GeneCards (Weizmann)MIR548Q
Ensembl hg19 (Hinxton)ENSG00000221331 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000221331 [Gene_View]  ENSG00000221331 [Sequence]  chr10:12725254-12725353 [Contig_View]  MIR548Q [Vega]
ICGC DataPortalENSG00000221331
TCGA cBioPortalMIR548Q
AceView (NCBI)MIR548Q
Genatlas (Paris)MIR548Q
SOURCE (Princeton)MIR548Q
Genetics Home Reference (NIH)MIR548Q
miRBaseMIR548Q
dbDEMCMIR548Q
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548Q  -     chr10:12725254-12725353 -  10p13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548Q  -     10p13   [Description]    (hg19-Feb_2009)
GoldenPathMIR548Q - 10p13 [CytoView hg19]  MIR548Q - 10p13 [CytoView hg38]
ImmunoBaseENSG00000221331
Genome Data Viewer NCBIMIR548Q [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548Q
Gene ExpressionMIR548Q [ NCBI-GEO ]   MIR548Q [ EBI - ARRAY_EXPRESS ]   MIR548Q [ SEEK ]   MIR548Q [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548Q [ Firebrowse - Broad ]
GenevisibleExpression of MIR548Q in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100313841
GTEX Portal (Tissue expression)MIR548Q
Human Protein AtlasENSG00000221331-MIR548Q [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548Q
Human Protein Atlas [tissue]ENSG00000221331-MIR548Q [tissue]
Protein Interaction databases
BioGRIDMIR548Q
STRING (EMBL)MIR548Q
ZODIACMIR548Q
Ontologies - Pathways
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXMIR548Q
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:09:53 CEST 2021

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