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MIR548T (microRNA 548t)

Identity

Alias_symbol (synonym)hsa-mir-548t
Other alias-
HGNC (Hugo) MIR548T
LocusID (NCBI) 100422849
Atlas_Id 69840
Location 7q35  [Link to chromosome band 7q35]
Location_base_pair Starts at 147626685 and ends at 148043927 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548T   38298
Cards
Entrez_Gene (NCBI)MIR548T  100422849  microRNA 548t
Aliases
GeneCards (Weizmann)MIR548T
Ensembl hg19 (Hinxton) [Gene_View]  chr7:147626685-148043927 [Contig_View]  MIR548T [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:147626685-148043927 [Contig_View]  MIR548T [Vega]
TCGA cBioPortalMIR548T
AceView (NCBI)MIR548T
Genatlas (Paris)MIR548T
WikiGenes100422849
SOURCE (Princeton)MIR548T
Genetics Home Reference (NIH)MIR548T
miRBaseMIR548T
dbDEMCMIR548T
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548T  -     chr7:147626685-148043927 +  7q35   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548T  -     7q35   [Description]    (hg38-Dec_2013)
EnsemblMIR548T - 7q35 [CytoView hg19]  MIR548T - 7q35 [CytoView hg38]
Mapping of homologs : NCBIMIR548T [Mapview hg19]  MIR548T [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)MIR548T
Gene ExpressionMIR548T [ NCBI-GEO ]   MIR548T [ EBI - ARRAY_EXPRESS ]   MIR548T [ SEEK ]   MIR548T [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548T [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422849
GTEX Portal (Tissue expression)MIR548T
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548T
DMDM Disease mutations100422849
Blocks (Seattle)MIR548T
Protein Interaction databases
BioGRIDMIR548T
STRING (EMBL)MIR548T
ZODIACMIR548T
Ontologies - Pathways
Huge Navigator MIR548T [HugePedia]
snp3D : Map Gene to Disease100422849
BioCentury BCIQMIR548T
ClinGenMIR548T
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422849
Chemical/Pharm GKB GenePA165664263
Clinical trialMIR548T
Miscellaneous
canSAR (ICR)MIR548T (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548T
EVEXMIR548T
GoPubMedMIR548T
iHOPMIR548T
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:31:33 CET 2017

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