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MIR548V (microRNA 548v)

Identity

Alias_symbol (synonym)hsa-mir-548v
Other alias-
HGNC (Hugo) MIR548V
LocusID (NCBI) 100422850
Atlas_Id 77404
Location 8p22  [Link to chromosome band 8p22]
Location_base_pair Starts at 17681578 and ends at 17681657 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548V   38302
Cards
Entrez_Gene (NCBI)MIR548V  100422850  microRNA 548v
Aliases
GeneCards (Weizmann)MIR548V
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:17681578-17681657 [Contig_View]  MIR548V [Vega]
TCGA cBioPortalMIR548V
AceView (NCBI)MIR548V
Genatlas (Paris)MIR548V
WikiGenes100422850
SOURCE (Princeton)MIR548V
Genetics Home Reference (NIH)MIR548V
miRBaseMIR548V
dbDEMCMIR548V
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548V  -     chr8:17681578-17681657 -  8p22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548V  -     8p22   [Description]    (hg19-Feb_2009)
EnsemblMIR548V - 8p22 [CytoView hg19]  MIR548V - 8p22 [CytoView hg38]
Mapping of homologs : NCBIMIR548V [Mapview hg19]  MIR548V [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548V
Gene ExpressionMIR548V [ NCBI-GEO ]   MIR548V [ EBI - ARRAY_EXPRESS ]   MIR548V [ SEEK ]   MIR548V [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548V [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422850
GTEX Portal (Tissue expression)MIR548V
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548V
DMDM Disease mutations100422850
Blocks (Seattle)MIR548V
Protein Interaction databases
BioGRIDMIR548V
STRING (EMBL)MIR548V
ZODIACMIR548V
Ontologies - Pathways
Huge Navigator MIR548V [HugePedia]
snp3D : Map Gene to Disease100422850
BioCentury BCIQMIR548V
ClinGenMIR548V
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422850
Chemical/Pharm GKB GenePA165585717
Clinical trialMIR548V
Miscellaneous
canSAR (ICR)MIR548V (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548V
EVEXMIR548V
GoPubMedMIR548V
iHOPMIR548V
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:18:39 CET 2017

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