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MIR548W (microRNA 548w)

Identity

Alias_symbol (synonym)hsa-mir-548w
Other alias-
HGNC (Hugo) MIR548W
LocusID (NCBI) 100422923
Atlas_Id 69841
Location 16p12.1  [Link to chromosome band 16p12]
Location_base_pair Starts at 26025237 and ends at 26025310 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548W   38255
Cards
Entrez_Gene (NCBI)MIR548W  100422923  microRNA 548w
Aliases
GeneCards (Weizmann)MIR548W
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr16:26025237-26025310 [Contig_View]  MIR548W [Vega]
TCGA cBioPortalMIR548W
AceView (NCBI)MIR548W
Genatlas (Paris)MIR548W
WikiGenes100422923
SOURCE (Princeton)MIR548W
Genetics Home Reference (NIH)MIR548W
miRBaseMIR548W
dbDEMCMIR548W
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548W  -     chr16:26025237-26025310 +  16p12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548W  -     16p12.1   [Description]    (hg19-Feb_2009)
EnsemblMIR548W - 16p12.1 [CytoView hg19]  MIR548W - 16p12.1 [CytoView hg38]
Mapping of homologs : NCBIMIR548W [Mapview hg19]  MIR548W [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548W
Gene ExpressionMIR548W [ NCBI-GEO ]   MIR548W [ EBI - ARRAY_EXPRESS ]   MIR548W [ SEEK ]   MIR548W [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548W [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100422923
GTEX Portal (Tissue expression)MIR548W
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548W
DMDM Disease mutations100422923
Blocks (Seattle)MIR548W
Protein Interaction databases
BioGRIDMIR548W
STRING (EMBL)MIR548W
ZODIACMIR548W
Ontologies - Pathways
Huge Navigator MIR548W [HugePedia]
snp3D : Map Gene to Disease100422923
BioCentury BCIQMIR548W
ClinGenMIR548W
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100422923
Chemical/Pharm GKB GenePA165450199
Clinical trialMIR548W
Miscellaneous
canSAR (ICR)MIR548W (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548W
EVEXMIR548W
GoPubMedMIR548W
iHOPMIR548W
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:29:42 CEST 2017

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