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MIR548X2 (microRNA 548x-2)

Identity

Alias_symbol (synonym)hsa-mir-548x-2
Other alias-
HGNC (Hugo) MIR548X2
LocusID (NCBI) 100616302
Atlas_Id 76640
Location 13q21.32  [Link to chromosome band 13q21]
Location_base_pair Starts at 66540462 and ends at 66540561 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)MIR548X2   41734
Cards
Entrez_Gene (NCBI)MIR548X2  100616302  microRNA 548x-2
Aliases
GeneCards (Weizmann)MIR548X2
Ensembl hg19 (Hinxton)ENSG00000263581 [Gene_View]  chr13:66540462-66540561 [Contig_View]  MIR548X2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000263581 [Gene_View]  chr13:66540462-66540561 [Contig_View]  MIR548X2 [Vega]
ICGC DataPortalENSG00000263581
TCGA cBioPortalMIR548X2
AceView (NCBI)MIR548X2
Genatlas (Paris)MIR548X2
WikiGenes100616302
SOURCE (Princeton)MIR548X2
Genetics Home Reference (NIH)MIR548X2
miRBaseMIR548X2
dbDEMCMIR548X2
Genomic and cartography
GoldenPath hg19 (UCSC)MIR548X2  -     chr13:66540462-66540561 -  13q21.32   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR548X2  -     13q21.32   [Description]    (hg38-Dec_2013)
EnsemblMIR548X2 - 13q21.32 [CytoView hg19]  MIR548X2 - 13q21.32 [CytoView hg38]
Mapping of homologs : NCBIMIR548X2 [Mapview hg19]  MIR548X2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000013 NC_018924 NT_024524 NW_004929388
Consensus coding sequences : CCDS (NCBI)MIR548X2
Alternative Splicing GalleryENSG00000263581
Gene ExpressionMIR548X2 [ NCBI-GEO ]   MIR548X2 [ EBI - ARRAY_EXPRESS ]   MIR548X2 [ SEEK ]   MIR548X2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548X2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100616302
GTEX Portal (Tissue expression)MIR548X2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548X2
DMDM Disease mutations100616302
Blocks (Seattle)MIR548X2
Human Protein AtlasENSG00000263581
Protein Interaction databases
FunCoupENSG00000263581
BioGRIDMIR548X2
STRING (EMBL)MIR548X2
ZODIACMIR548X2
Ontologies - Pathways
Huge Navigator MIR548X2 [HugePedia]
snp3D : Map Gene to Disease100616302
BioCentury BCIQMIR548X2
ClinGenMIR548X2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100616302
Clinical trialMIR548X2
Miscellaneous
canSAR (ICR)MIR548X2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548X2
EVEXMIR548X2
GoPubMedMIR548X2
iHOPMIR548X2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Tue Mar 14 12:31:34 CET 2017

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