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MIR548XHG (MIR548X host gene)

Identity

Other alias-
HGNC (Hugo) MIR548XHG
LocusID (NCBI) 101927797
Atlas_Id 77934
Location 21q21.1  [Link to chromosome band 21q21]
Location_base_pair Starts at 18561265 and ends at 18759812 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR548XHG   52006
Cards
Entrez_Gene (NCBI)MIR548XHG  101927797  MIR548X host gene
Aliases
GeneCards (Weizmann)MIR548XHG
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr21:18561265-18759812 [Contig_View]  MIR548XHG [Vega]
TCGA cBioPortalMIR548XHG
AceView (NCBI)MIR548XHG
Genatlas (Paris)MIR548XHG
WikiGenes101927797
SOURCE (Princeton)MIR548XHG
Genetics Home Reference (NIH)MIR548XHG
miRBaseMIR548XHG
dbDEMCMIR548XHG
Genomic and cartography
GoldenPath hg38 (UCSC)MIR548XHG  -     chr21:18561265-18759812 -  21q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR548XHG  -     21q21.1   [Description]    (hg19-Feb_2009)
EnsemblMIR548XHG - 21q21.1 [CytoView hg19]  MIR548XHG - 21q21.1 [CytoView hg38]
Mapping of homologs : NCBIMIR548XHG [Mapview hg19]  MIR548XHG [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC028044 BC051441
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR548XHG
Cluster EST : UnigeneHs.551743 [ NCBI ]
CGAP (NCI)Hs.551743
Gene ExpressionMIR548XHG [ NCBI-GEO ]   MIR548XHG [ EBI - ARRAY_EXPRESS ]   MIR548XHG [ SEEK ]   MIR548XHG [ MEM ]
Gene Expression Viewer (FireBrowse)MIR548XHG [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)101927797
GTEX Portal (Tissue expression)MIR548XHG
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR548XHG
DMDM Disease mutations101927797
Blocks (Seattle)MIR548XHG
Protein Interaction databases
BioGRIDMIR548XHG
STRING (EMBL)MIR548XHG
ZODIACMIR548XHG
Ontologies - Pathways
Huge Navigator MIR548XHG [HugePedia]
snp3D : Map Gene to Disease101927797
BioCentury BCIQMIR548XHG
ClinGenMIR548XHG
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD101927797
Clinical trialMIR548XHG
Miscellaneous
canSAR (ICR)MIR548XHG (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR548XHG
EVEXMIR548XHG
GoPubMedMIR548XHG
iHOPMIR548XHG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:29:23 CEST 2017

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