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MIR550A1 (microRNA 550a-1)

Identity

Alias_namesMIRN550-1
MIR550-1
microRNA 550-1
Alias_symbol (synonym)hsa-mir-550-1
Other aliashsa-mir-550a-1
mir-550a-1
HGNC (Hugo) MIR550A1
LocusID (NCBI) 693133
Atlas_Id 69846
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 30289794 and ends at 30289890 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
MIR550A1 (7p14.3) / ZNRF2 (7p14.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR550A1   32804
Cards
Entrez_Gene (NCBI)MIR550A1  693133  microRNA 550a-1
AliasesMIR550-1; MIRN550-1; hsa-mir-550a-1; mir-550a-1
GeneCards (Weizmann)MIR550A1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr7:30289794-30289890 [Contig_View]  MIR550A1 [Vega]
TCGA cBioPortalMIR550A1
AceView (NCBI)MIR550A1
Genatlas (Paris)MIR550A1
WikiGenes693133
SOURCE (Princeton)MIR550A1
Genetics Home Reference (NIH)MIR550A1
miRBaseMIR550A1
dbDEMCMIR550A1
Genomic and cartography
GoldenPath hg38 (UCSC)MIR550A1  -     chr7:30289794-30289890 +  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)MIR550A1  -     7p14.3   [Description]    (hg19-Feb_2009)
EnsemblMIR550A1 - 7p14.3 [CytoView hg19]  MIR550A1 - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBIMIR550A1 [Mapview hg19]  MIR550A1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609565
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)MIR550A1
Gene ExpressionMIR550A1 [ NCBI-GEO ]   MIR550A1 [ EBI - ARRAY_EXPRESS ]   MIR550A1 [ SEEK ]   MIR550A1 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR550A1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693133
GTEX Portal (Tissue expression)MIR550A1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR550A1
DMDM Disease mutations693133
Blocks (Seattle)MIR550A1
Protein Interaction databases
BioGRIDMIR550A1
STRING (EMBL)MIR550A1
ZODIACMIR550A1
Ontologies - Pathways
Huge Navigator MIR550A1 [HugePedia]
snp3D : Map Gene to Disease693133
BioCentury BCIQMIR550A1
ClinGenMIR550A1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693133
Chemical/Pharm GKB GenePA164722847
Clinical trialMIR550A1
Miscellaneous
canSAR (ICR)MIR550A1 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR550A1
EVEXMIR550A1
GoPubMedMIR550A1
iHOPMIR550A1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed May 31 15:29:24 CEST 2017

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