Atlas of Genetics and Cytogenetics in Oncology and Haematology


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MIR550A2 (microRNA 550a-2)

Identity

Alias_namesMIRN550-2
MIR550-2
microRNA 550-2
Alias_symbol (synonym)hsa-mir-550-2
hsa-mir-550a-2
Other aliasmir-550a-2
HGNC (Hugo) MIR550A2
LocusID (NCBI) 693134
Atlas_Id 69847
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 32772593 and ends at 32772689 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)MIR550A2   32805
Cards
Entrez_Gene (NCBI)MIR550A2  693134  microRNA 550a-2
AliasesMIR550-2; MIRN550-2; hsa-mir-550a-2; mir-550a-2
GeneCards (Weizmann)MIR550A2
Ensembl hg19 (Hinxton)ENSG00000207573 [Gene_View]  chr7:32772593-32772689 [Contig_View]  MIR550A2 [Vega]
Ensembl hg38 (Hinxton)ENSG00000207573 [Gene_View]  chr7:32772593-32772689 [Contig_View]  MIR550A2 [Vega]
ICGC DataPortalENSG00000207573
TCGA cBioPortalMIR550A2
AceView (NCBI)MIR550A2
Genatlas (Paris)MIR550A2
WikiGenes693134
SOURCE (Princeton)MIR550A2
Genetics Home Reference (NIH)MIR550A2
miRBaseMIR550A2
dbDEMCMIR550A2
Genomic and cartography
GoldenPath hg19 (UCSC)MIR550A2  -     chr7:32772593-32772689 +  7p14.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)MIR550A2  -     7p14.3   [Description]    (hg38-Dec_2013)
EnsemblMIR550A2 - 7p14.3 [CytoView hg19]  MIR550A2 - 7p14.3 [CytoView hg38]
Mapping of homologs : NCBIMIR550A2 [Mapview hg19]  MIR550A2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)LM609566
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000007 NC_018918 NT_007819 NW_004929329
Consensus coding sequences : CCDS (NCBI)MIR550A2
Alternative Splicing GalleryENSG00000207573
Gene ExpressionMIR550A2 [ NCBI-GEO ]   MIR550A2 [ EBI - ARRAY_EXPRESS ]   MIR550A2 [ SEEK ]   MIR550A2 [ MEM ]
Gene Expression Viewer (FireBrowse)MIR550A2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)693134
GTEX Portal (Tissue expression)MIR550A2
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)MIR550A2
DMDM Disease mutations693134
Blocks (Seattle)MIR550A2
Human Protein AtlasENSG00000207573
Protein Interaction databases
FunCoupENSG00000207573
BioGRIDMIR550A2
STRING (EMBL)MIR550A2
ZODIACMIR550A2
Ontologies - Pathways
Huge Navigator MIR550A2 [HugePedia]
snp3D : Map Gene to Disease693134
BioCentury BCIQMIR550A2
ClinGenMIR550A2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD693134
Chemical/Pharm GKB GenePA164722848
Clinical trialMIR550A2
Miscellaneous
canSAR (ICR)MIR550A2 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineMIR550A2
EVEXMIR550A2
GoPubMedMIR550A2
iHOPMIR550A2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:31:35 CET 2017

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